Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0844 |
Symbol | |
ID | 3681862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1029574 |
End bp | 1030518 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637716178 |
Product | glycosyl transferase family protein |
Protein accession | YP_321363 |
Protein GI | 75907067 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0881511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00160187 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | GTGCCAATAA TATCTGTAAT CATTCCTGTA TACAATGGTG AAAAAACAAT TATTGAAACC ATTGCTTCCG TTCAACAGCA AACCTTCCTA GATATTGAAA TCATTGTGAT CAATGATGGC TCAACAGATA AGACTCTTGA GCTTGTGAAA AATATTCCAG ATAATCGCTT GAAAATCTTT TCTTATGAAA ATGGTGGTTT ACCCGTAGCT CGTAATCGCG GTATTACCCA CGCTGTAGGT CAATTTATTG CTTTCATTGA TGCTGATGAT CTTTGGACAC CAGATAAGCT AGAACTTCAG TTTGCTGCAT TACAAGAATA TCCAGAAGCA GGATTAGCTT ATAGTTGGAC TTATTATAAA TTTGCAAATG AAGCAGATTC TTATGCTGAC GAATCTAATT CATTTGTAGG TGATGTTTAT GCTGAACTGC TAGTCAAGAA TTTTTTGCAG AACGGTTCCA ATCCTCTAAT TCGGCGAGCA GCTATTGACT CTGTAGGACT TTTTGATCCG ACTTTGAAAT CTTGCGAAGA TTGGGATTTT TACCTACGGT TAGCGGCTAA ATGGCAGTTT GCTTTAGTTA AAAAAGCACA AATTATCTAT CGTCAGTCCC CAACTGCTAT GACATCTAAA TTAGATGTTA TGGAAAAGTA TAGTTCTGTT GTCATAGAGA GAGCTTTTAA TACAGCTCCT CCAGAATTAC AACATCTAAA AAAACAAAGT CTAGCATGGG TTTACAAATT TACGGCTCAA CAATGTTTGA AATATAACAG TGATAAACTC GCTGATATTA AACTAGCCGC TAAAAGATTA AAAATGGCTA TTACTCTCTA TCCAAAAAAC CTTTTAGAAG ACTACACTCA TGGTCTCATA AGAAAACTTA TTAAAAGTTG GATATTATTA CAATTTCACA TGGTTGATAT TCCTGAAAAA TCTCACAATA CTTAA
|
Protein sequence | MPIISVIIPV YNGEKTIIET IASVQQQTFL DIEIIVINDG STDKTLELVK NIPDNRLKIF SYENGGLPVA RNRGITHAVG QFIAFIDADD LWTPDKLELQ FAALQEYPEA GLAYSWTYYK FANEADSYAD ESNSFVGDVY AELLVKNFLQ NGSNPLIRRA AIDSVGLFDP TLKSCEDWDF YLRLAAKWQF ALVKKAQIIY RQSPTAMTSK LDVMEKYSSV VIERAFNTAP PELQHLKKQS LAWVYKFTAQ QCLKYNSDKL ADIKLAAKRL KMAITLYPKN LLEDYTHGLI RKLIKSWILL QFHMVDIPEK SHNT
|
| |