Gene Ava_0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0843 
Symbol 
ID3681861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1028569 
End bp1029519 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content34% 
IMG OID637716177 
Productglycosyl transferase family protein 
Protein accessionYP_321362 
Protein GI75907066 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.273314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00465248 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTACTA TATCTGTAAT TATTCCTGCC TATAATGCTG AACGCACAAT TTTAGCGACA 
ATATCTTCTG TTCAGCAACA GACATTCTCA GATTTTGAGT TGATTATTAT TAATGATGGT
TCTACTGACA GGACTCTAGA GTTAATTCAG AATATTCAAG ATGAGCGATT GAAGATATTT
TCTTATGAAA ATGGTGGTTT ACCAGTAGCA CGTAATAGAG GAATTTCTCT TGCAAGTGGG
GAATTTATTG CTTTCCTTGA TGCCGATGAT TTGTGGACAC CAGATAAATT AGAATTGCAA
TTAGCAGCAT TACAACAAAA TCCAGAGGCG GGAGTTGCTT ATAGTTGGAC TTATTTTATG
GATGAGCAGG GAAAATCTTC AATCCCTGGT GTTTCCCTAT TCTTTGAGGG TGATGTCCAA
GCTAATTTGT TAGTTAATAA TTTTCTTGCT AGTGGTTCAA ATCCCCTAGT TCGTAAGCAA
GCCATTGAAT CTGTAGGAGA TTTTGATTCT AACTATAAGG CTTGTGAAGA TTGGGATTAT
TGGTTACGTT TATCAGCCGA TTGGAATTTT GTTGTAGTTC GCAAACATCA AATTTTTTAT
CGCCAATCTG CCACTTCCAT GTCATCTACT AAAGTTAAAA ATATGGAAGA TAATGGATTA
TTAGTGATTG AAAAAACTTT TCAGTCTGTA AAACCGGAAC TGCAATATTT AAAAAATCAG
AGTTTGGCCT GGATTTATCA ATATTCTACA CAACAATACC TTAAGCAGAA TATTAACAAT
ATTGAGGCAG TCCGTCATGC TAGAGAAAAA TTATGGCAGG CAATTCGCTT GCACCCGCCA
ATTTTATTAG CAAATTATGC TCAGGATTTA ATTATCTGGC TGATAAAAAA ATGGATATTA
ACTAAAATAT ATATCCTAAG AAATAAAAAT AAACCACTAA TGATTAAATA A
 
Protein sequence
MPTISVIIPA YNAERTILAT ISSVQQQTFS DFELIIINDG STDRTLELIQ NIQDERLKIF 
SYENGGLPVA RNRGISLASG EFIAFLDADD LWTPDKLELQ LAALQQNPEA GVAYSWTYFM
DEQGKSSIPG VSLFFEGDVQ ANLLVNNFLA SGSNPLVRKQ AIESVGDFDS NYKACEDWDY
WLRLSADWNF VVVRKHQIFY RQSATSMSST KVKNMEDNGL LVIEKTFQSV KPELQYLKNQ
SLAWIYQYST QQYLKQNINN IEAVRHAREK LWQAIRLHPP ILLANYAQDL IIWLIKKWIL
TKIYILRNKN KPLMIK