Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0839 |
Symbol | |
ID | 3681857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1023857 |
End bp | 1025128 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637716173 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_321358 |
Protein GI | 75907062 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.305723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0285529 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAATGA AAAAGATAAA ACAACTATTA TCAAGTCAAT TTATCCGCAA TGTAGGTTGG TTGGGAACAG CAGAGTTGAT AAATCGTATT TTTCGCTTAG GAACGACAGT AACTCTAGCG CGAATGTTTA GTTCCCAAGA TTACGGAGCA ATGGCTCTCA TCTACACAAT TTTTGAATTT GCCAATGTCT TCACTCTCAG AGGTGGTATC GGCGCAAAGA TTATTCAAGC TGATGAAAAG GATCTGAACA CGATATGTAA TACTTCATTT TGGTTAAATC TCATTCTGGG TATTTCAGTT TTCTTGTGCC AATGTATCGC TGCATTTCCC ATCGCTCAAT TTTATGGTAA TCAACAACTA GTCTTCCCTA TCTGTACCCT AGCTGTTGTA TACCTGATAT ACCCTATTTA CATGATTAAT TCTGCTCTGA TTGAACGCGA TAACCATCTA AAGATTACAG CTTTATGTAA TGCTATCCAA GCATTTGTTG GAAATGTGAT TACAGTTGTG TTTGCTCTTT TAGGTATGGG GATTTGGGCT ATAGTTTTAC CTATAGTTTT CTCAACTCCT GTTTGGGTTA TTGTTACGTG GATGAATAAC TCTTGGCGAC CTCCGACAAA ATTTTCTCTC GATAAATGGC GAGAAGTTAC CAGTTTTGGA AAAAATATTC TGGCTGTAGA ATTTTTGAAT AAAATCAGAA ATAACTTAGA TTATTTAATA GTTGGTAAGT TTCTAGGTAC AGAACAATTA GGAATTTACT TTTTCGCCTT CAATGCTGGT TCTGGTATTA GTATAAATGT GATTAATACA TTTATGTCTG CCTTATTTCC TTATATATGT GCAGTCAGAG AAAATTTGGC AGAATTTAAG CAAAGATATG TCAATAGTTT AAAAAAGATT CTATCGTTTG TCATACCAAT TATTCTAGCC CAAGCTATTT TAGCTCCTAT ATATGTGCCA ATAGTCTTTG GCGAAAAATG GACGACAGCC GTACCAATTT TGATTTTAAT TTGTTTATCA GTTATCCCTA GAGTATTTGG ATGGGCTAAT TCACTTTTAC TCAATGCTGT AGATAAAACA AATATTAACT TAAATATTAA TCTTCTATTT ACTATATTTT TTGCCGCCGC AGTATTATTA ACAGTTCAGT GGGGTGTGTT TTGGGTAGCT GTGGGTGTTT TATTATCTCA TGTACTGTTT ATTCCTGCGT CTGTTTTATG GAGTTATAGG TATATTTTTC ACAATCGTAC TCACACTTTG AGCAAGGTTT AG
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Protein sequence | MLMKKIKQLL SSQFIRNVGW LGTAELINRI FRLGTTVTLA RMFSSQDYGA MALIYTIFEF ANVFTLRGGI GAKIIQADEK DLNTICNTSF WLNLILGISV FLCQCIAAFP IAQFYGNQQL VFPICTLAVV YLIYPIYMIN SALIERDNHL KITALCNAIQ AFVGNVITVV FALLGMGIWA IVLPIVFSTP VWVIVTWMNN SWRPPTKFSL DKWREVTSFG KNILAVEFLN KIRNNLDYLI VGKFLGTEQL GIYFFAFNAG SGISINVINT FMSALFPYIC AVRENLAEFK QRYVNSLKKI LSFVIPIILA QAILAPIYVP IVFGEKWTTA VPILILICLS VIPRVFGWAN SLLLNAVDKT NINLNINLLF TIFFAAAVLL TVQWGVFWVA VGVLLSHVLF IPASVLWSYR YIFHNRTHTL SKV
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