Gene Ava_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0838 
Symbol 
ID3681856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1022753 
End bp1023727 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content35% 
IMG OID637716172 
Productglycosyl transferase family protein 
Protein accessionYP_321357 
Protein GI75907061 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.115028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0515861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAA TATCTGTAAT TATTCCCGCC TATAATGCTG AGCGCACAAT TTTAGAAACG 
ATTAACTCAG TTCTACAACA AACATTCTCA GATTTGGAAA TCATTGTGAT CAATGATGGA
TCTACAGACA GAACAGTAGA AGTTTTACAA AATGTTGATG ACGCGCGCTT GAAAGTTTAT
TCATATGAAA ATAGTAGAGC TTCTGGCGCT CGCAATCATG GCATTTCTCA CGCAGTAGGA
GATTTTATAA GTTTTCTTGA TGCTGATGAT TTGTGGACAC CGGATAAGCT TGAATTACAA
TTAGCTGCTT TAAATCATCA TCCAGAGGCT GGTGTAGCCT ATAGCTGGAC TTATACAATT
GATGATAAAG GAGAATTATT AAAGCCTTTT GAACCTTTAT ATGAAGGGAA TATATATACA
GATTTGTTAT TAGCGAATTT TCTCACCAAT GGCTCGAATC CTCTGATTCG TAAAGCAGCA
ATAGCATCGG TAGGAGAGTT TGATACTACA TTGAGATCAG GTGAAGATTG GGACTATTGG
TTGCGCTTGG CATATAAATG GCCTTTTGTT GTAGTCAAAC AGCATCAAGT TCTTTATCGC
CGTTCTGTTA CATCCAAGTC ATTCAAATTA CAAATAATTC GGGAAGCTAG TTTGGCTATT
TTAGATAAAG CGATGAAAGT ACTTCCTTTA GAATCGCAAT ACCTGAAAAA TCATAGTTTA
TCTAATATTT ATAGATACAA TGTAGAGTTA TATCTAGACA GTATTGATAA TAACGGAACC
GTTGATATTA AGTATGTAAT CGGCAATTTG CTGGGTTATA TTCGCTCAAG ACCCCAAACT
ATCAAGGAGA TATATACATA TAAGTTAATC ATAAAAATTT CATTAGTTAT AGTACTTTCC
CCGAAATTGA TGAGCCGTTT GTTGCAATTT ATCAAAAAAA GTAAGCAGAT AAAAAATCTC
CAAGTACAGC CGTAG
 
Protein sequence
MPKISVIIPA YNAERTILET INSVLQQTFS DLEIIVINDG STDRTVEVLQ NVDDARLKVY 
SYENSRASGA RNHGISHAVG DFISFLDADD LWTPDKLELQ LAALNHHPEA GVAYSWTYTI
DDKGELLKPF EPLYEGNIYT DLLLANFLTN GSNPLIRKAA IASVGEFDTT LRSGEDWDYW
LRLAYKWPFV VVKQHQVLYR RSVTSKSFKL QIIREASLAI LDKAMKVLPL ESQYLKNHSL
SNIYRYNVEL YLDSIDNNGT VDIKYVIGNL LGYIRSRPQT IKEIYTYKLI IKISLVIVLS
PKLMSRLLQF IKKSKQIKNL QVQP