Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0838 |
Symbol | |
ID | 3681856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1022753 |
End bp | 1023727 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 637716172 |
Product | glycosyl transferase family protein |
Protein accession | YP_321357 |
Protein GI | 75907061 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.115028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0515861 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAAAA TATCTGTAAT TATTCCCGCC TATAATGCTG AGCGCACAAT TTTAGAAACG ATTAACTCAG TTCTACAACA AACATTCTCA GATTTGGAAA TCATTGTGAT CAATGATGGA TCTACAGACA GAACAGTAGA AGTTTTACAA AATGTTGATG ACGCGCGCTT GAAAGTTTAT TCATATGAAA ATAGTAGAGC TTCTGGCGCT CGCAATCATG GCATTTCTCA CGCAGTAGGA GATTTTATAA GTTTTCTTGA TGCTGATGAT TTGTGGACAC CGGATAAGCT TGAATTACAA TTAGCTGCTT TAAATCATCA TCCAGAGGCT GGTGTAGCCT ATAGCTGGAC TTATACAATT GATGATAAAG GAGAATTATT AAAGCCTTTT GAACCTTTAT ATGAAGGGAA TATATATACA GATTTGTTAT TAGCGAATTT TCTCACCAAT GGCTCGAATC CTCTGATTCG TAAAGCAGCA ATAGCATCGG TAGGAGAGTT TGATACTACA TTGAGATCAG GTGAAGATTG GGACTATTGG TTGCGCTTGG CATATAAATG GCCTTTTGTT GTAGTCAAAC AGCATCAAGT TCTTTATCGC CGTTCTGTTA CATCCAAGTC ATTCAAATTA CAAATAATTC GGGAAGCTAG TTTGGCTATT TTAGATAAAG CGATGAAAGT ACTTCCTTTA GAATCGCAAT ACCTGAAAAA TCATAGTTTA TCTAATATTT ATAGATACAA TGTAGAGTTA TATCTAGACA GTATTGATAA TAACGGAACC GTTGATATTA AGTATGTAAT CGGCAATTTG CTGGGTTATA TTCGCTCAAG ACCCCAAACT ATCAAGGAGA TATATACATA TAAGTTAATC ATAAAAATTT CATTAGTTAT AGTACTTTCC CCGAAATTGA TGAGCCGTTT GTTGCAATTT ATCAAAAAAA GTAAGCAGAT AAAAAATCTC CAAGTACAGC CGTAG
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Protein sequence | MPKISVIIPA YNAERTILET INSVLQQTFS DLEIIVINDG STDRTVEVLQ NVDDARLKVY SYENSRASGA RNHGISHAVG DFISFLDADD LWTPDKLELQ LAALNHHPEA GVAYSWTYTI DDKGELLKPF EPLYEGNIYT DLLLANFLTN GSNPLIRKAA IASVGEFDTT LRSGEDWDYW LRLAYKWPFV VVKQHQVLYR RSVTSKSFKL QIIREASLAI LDKAMKVLPL ESQYLKNHSL SNIYRYNVEL YLDSIDNNGT VDIKYVIGNL LGYIRSRPQT IKEIYTYKLI IKISLVIVLS PKLMSRLLQF IKKSKQIKNL QVQP
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