Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0775 |
Symbol | |
ID | 3680500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 947811 |
End bp | 948986 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637716104 |
Product | FO synthase subunit 2 |
Protein accession | YP_321294 |
Protein GI | 75906998 |
COG category | [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily [TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.848355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00153433 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAATTATA AAACTGTTGA TGTAATTCTT GAGCGTGCCT TGTTAGGGGA TGATATATCA CCACAAGAAG GAATAGTCTT ACTAACGCAA ACGGACTCAG GTGCGATCGC CTCTATTCGC CATACAGCTG ACAAACTCCG CCAACAGCAA GCTGGGGATA CTGTTACTTA CGTAATTAAT CGGAATATTA ACTTTACTAA CATTTGTGAG CAGCACTGTA GTTTTTGTGC GTTTCGGCGA AATGATGGAG ATGCTGATGC TTATTGGTTA GATTGGGCAG GTATTTTGGA AAAATCCCAC GACGCGGTGC AGAGAGGGGC AACAGAAATC TGTATGCAGG GAGGATTGCA CCCACAAGCC CAGATTGATG GTAAATCTTT GCCTTACTAC CTGAAATTGC TAGAAACAAT TAAGCAAGAA TATCCCCAAA TTCATCTACA CGCTTTTTCA CCCCAAGAGG TACAGTTTAT CGCCAGAATG GATGGTCTGG AATATGCTGG TGTCATCTCT GCTTTACAAA ATGCTGGCGT TAATTCTTTG CCGGGAACAG CAGCTGAAGT TTTAGATGAT CAAGTGCGGC GCGTACTCTG TCCTGAGAAG ATTAATACTG CAACTTGGTT AGAGATTATT AGTACAGCCC ACAAATTAGG CTTACATACG ACCAGTACTA TATTATCAGG GCATATTGAA ACCCCAGAAC AACAAATTGG GCATTTAGAA AAATTGCGAT CGCTCCAACA AATAGCCACC AATCAAAAAT ACCCAGCCCG AATTACCGAG TTTATTGTCT TACCTTTCGT GGGTCAAGAA GCACCTAAAT CTTTACGCCG TCGTGTCGGG CGCGATCAAC CAGTTTTAGC CGATGCTTTA TTACTGGGTG CAGTCGCAAG AATTTACTTA GGTAATTGGA TAGCCAACCA TCAACCAAGT TGGGTCAAAT TAGGGCTAGC TGGGGCGACA GAAGCCTTAA ATTGGGGTTG TAATGATATA GGCGGTACAT TGATGGAAGA ACACATCACC ACAATGGCTG GTGCTGTAGG TGGTACGTGT ATGGAAGTCG AAACCTTGCA AAATGCGATC GCCTCCATAG GTAGACCTTA CCAACAACGA GATACGCTTT ATCAACCAGT AGAGTCAGCC AAACAGTTGG CTAATACGGT CATAGGTAAT GGGTAA
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Protein sequence | MNYKTVDVIL ERALLGDDIS PQEGIVLLTQ TDSGAIASIR HTADKLRQQQ AGDTVTYVIN RNINFTNICE QHCSFCAFRR NDGDADAYWL DWAGILEKSH DAVQRGATEI CMQGGLHPQA QIDGKSLPYY LKLLETIKQE YPQIHLHAFS PQEVQFIARM DGLEYAGVIS ALQNAGVNSL PGTAAEVLDD QVRRVLCPEK INTATWLEII STAHKLGLHT TSTILSGHIE TPEQQIGHLE KLRSLQQIAT NQKYPARITE FIVLPFVGQE APKSLRRRVG RDQPVLADAL LLGAVARIYL GNWIANHQPS WVKLGLAGAT EALNWGCNDI GGTLMEEHIT TMAGAVGGTC MEVETLQNAI ASIGRPYQQR DTLYQPVESA KQLANTVIGN G
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