Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0774 |
Symbol | |
ID | 3680499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 946843 |
End bp | 947754 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637716103 |
Product | extracellular solute-binding protein |
Protein accession | YP_321293 |
Protein GI | 75906997 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.220084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00138708 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTATGT ATAAAAATTT AGCGATCGCT CTTTTCAGTT TGACCTTGAC GACAGTCATA CCAGATGCAG CATTCGGGGA AACTGTCATG CAGAAAGTTG CTCGTACAGG GGTATTAACT GCTGGCACTA GTAGAGATGC AATGCCCTTT GCCTATACTA ATGCTCAGGG ACAGTTGACT GGTTACTCTG TCGATATGCT GTCTGTAATC AAGCAACAGT TAGAAAAAGA ATTAGGGAAA AAAATACAAC TAAAATTAGT GGCATTAACT CCTGCACAAA GGATTCCCAA AATAGTTAAT CAGCAAGTTG ATATTGTTTG TGATGCTAGT AGTTTTACCT GGGAACGAGA TAAAAAGGTA GATTTTTCTG TCAGCTATGG GGCTACTGGT ACTCAATTAT TAGTAAAGTC TGGTAGCAAT CTTGGTTCCC CTGAATCGCT AATTGGTAAA CGCATTGGTG TATTAGCACA AACTACCAAT GAGCAGGCAA TCAAGCGGGT ACAACCCCAA GCTAAACTAG TTTATTTGAA AAGTCGTTCA GAAGGTTATA CAGCTTTGCA AGAGGGCAAA ATAGATGCTT TCTCATCTGA TAGCATTTTG TTAGAAAGCT GGTTGCAAAA GGCAAAAAAT CCCGATGATT TTGCGATCGT CCCTGATCGC CCTTATTCAC GAGAGGGCAT TGCCTGCATG GTTCCTGAGA ATAATTCTAA ATTTTTGGAT GCAGTCAATT ATTCTCTGGT GAAGTTTATG CAGGGATTTG TCAATGGTGA TACTCGATAT GTCACAACTT TTGATCGCTG GTTTGGGGCT AAGGGTGTCG TTTTGCTAAA TCGGGATTTG CGCGATTTAA TGAAAGAAAC GATGCAGTTG TTTATCGAAT TTCGGGAAGA AATTCCTCAA CAAGAACTTT AA
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Protein sequence | MTMYKNLAIA LFSLTLTTVI PDAAFGETVM QKVARTGVLT AGTSRDAMPF AYTNAQGQLT GYSVDMLSVI KQQLEKELGK KIQLKLVALT PAQRIPKIVN QQVDIVCDAS SFTWERDKKV DFSVSYGATG TQLLVKSGSN LGSPESLIGK RIGVLAQTTN EQAIKRVQPQ AKLVYLKSRS EGYTALQEGK IDAFSSDSIL LESWLQKAKN PDDFAIVPDR PYSREGIACM VPENNSKFLD AVNYSLVKFM QGFVNGDTRY VTTFDRWFGA KGVVLLNRDL RDLMKETMQL FIEFREEIPQ QEL
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