Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0744 |
Symbol | |
ID | 3679537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 917927 |
End bp | 918982 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637716073 |
Product | anti-sigma-factor antagonist (STAS) and sugar transfersase |
Protein accession | YP_321263 |
Protein GI | 75906967 |
COG category | [M] Cell wall/membrane/envelope biogenesis [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000102583 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACATGG CAACCAAAGT GCAGAGCTTC ATGACTAGCC AACCCACAGA GGTAAATTTT CTAGTTACCA CCCTAAATGA AACCCTAATA GTGCAGGTTC CTGTCCGATT AAGCGTGCTG GAAGCAGTGG GCTTTAAGCA AACCTGCCAA GAATTAACCA AAGGAAACTC TCATCCCAAG GAAATCATTA TTGATTTTCA ACAAACTACC TTTATGGATA GCAGTGGCTT GGGGGCCTTA GTTAGTAACT TTAAAACCAC TAAAGAAAAA GGAATTGTCA TGATCCTGCG GAATGTCACT CCTCAGGTCA TGGCAGTATT AAACCTCACC GGACTAGATA AAGTTTTTTC TATTGAACCC AGTAGCAATA TATCCCCAAC AGAAGCTGAG AATGCTTTAG ATAATCAGAA AGCTTCTACT CGTAAAATAG AGCAACTACC TACCACTCAT CCCTCTGTTG CATCCTGGAC TAAACGATTT TTGGATATTA TTGGCGCTTT AGTGGGTTTG GTAATCACGG GAATTTTGTG TATTCCCATT GTGATTGCAA TTCAAATCGA TGACCCAGGC CCCATTTTCT TTGGACAAAT CCGTTGTGGT TGGATGGGTA AACGCTTCAA AATTTGGAAA TTTCGCTCCA TGTGTGTGGA TGCGGAAGCG AAAAAATCTC AAGTTGAGAA CCAGGTACAG GGGGCTTTTT TCAAGAATGA AAACGATCCT AGAATTACAC GAGTAGGCAG ATTTTTACGG CGTACTAGTC TGGATGAATT TCCTCAATTT TGGAATGTTT TGAAAGGAGA TATGAGTTTA GTAGGGACTA GACCACCTAC ACCCGATGAA GTAGAACGCT ATGAAGTACC AGAATGGCAA CGTTTGGATG TTAAACCCGG TATGACTGGG GAATGGCAAG TAAATGGTAG GTCTAAAGTT CGTAGTTTTG AAGATGTAAT TCGTCTAGAT TTGCTATATC AAAAAAACTG GAGCTTGATG TATGATTTGA AGCTAATTTT CAAAACTGTA GCTATTCTAT TTAATAGAAA TAGTGGCGCT TATTAG
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Protein sequence | MYMATKVQSF MTSQPTEVNF LVTTLNETLI VQVPVRLSVL EAVGFKQTCQ ELTKGNSHPK EIIIDFQQTT FMDSSGLGAL VSNFKTTKEK GIVMILRNVT PQVMAVLNLT GLDKVFSIEP SSNISPTEAE NALDNQKAST RKIEQLPTTH PSVASWTKRF LDIIGALVGL VITGILCIPI VIAIQIDDPG PIFFGQIRCG WMGKRFKIWK FRSMCVDAEA KKSQVENQVQ GAFFKNENDP RITRVGRFLR RTSLDEFPQF WNVLKGDMSL VGTRPPTPDE VERYEVPEWQ RLDVKPGMTG EWQVNGRSKV RSFEDVIRLD LLYQKNWSLM YDLKLIFKTV AILFNRNSGA Y
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