Gene Ava_0727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0727 
Symbol 
ID3679382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp898053 
End bp899201 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content43% 
IMG OID637716055 
Productglycosyl transferase, group 1 
Protein accessionYP_321246 
Protein GI75906950 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0832639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.165057 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATAG CTTGGATTGG AAAAAAATCA CCCTTTTGTG GCAATGTCAC TTACAGTAGA 
GAAGTTACAA ACGCCTTGCT AGACAGGGGA CATGAAGTCA GTTTTCTCCA CTTTGCTCAA
GAAGAAACTG AACCTGACAA CTGGCCGAAA TTCCAAGAAG TTCCTCTACC CTTCATTTAT
AAGTCTCAGG TCTACACAAT TCCAACGTTC AAAGCAACTA AGGTTTTAAC TGATTCGTTG
CGGGAAATCA AGCCAGATAT TGTCCATGCG TCTCTGACTT TATCTCCCCT GGACTTTTTT
CTACCAGAAA TTTGTGATCA ACTGAATTTG CCCCTAATTG CCACATTTCA CACTCCATTT
GCAGGCAAAG GCGCAAAACT GATATCAGGA ACACAACTTC TAGCTTATCA ACTATACGCT
CCTTTTTTGG GTAACTACGA TCGCGTCATT GTCTTTTCCC AAATTCAGCG AGAACTATTA
GCAAGTATGG GTGTGCGGGA GAAAAATATC GCAGTTATCC CCAATGGTGT GGATACCAGC
AAATACTCCC CTGGGTCTTC TGCGGTGAAA ACAGAATTTC AAGCGGAACG ATTGTTTGTC
TACCAAGGAA GAATCGCCCC AGAGAAAAAT GTAGAATCCC TGTTAAGAGC TTGGAAGCAA
GCTAATATGG GGGCTGATAG TAAGTTATTA ATGGTGGGGG ATGGGCCTCT GAGAGCTACT
TTAGAACCCT TTTATGGTTC TGAGTATGGC ATTATCTGGT TGGGATTTGT CGCTGACGAA
GACCGACGCA TACAAATTCT TCAAGGTGCA GATGTATTTA TTTTACCTTC TCTAGTTGAG
GGTTTATCCT TATCGCTGTT AGAGGGTATG GCTTGTGGAC TCGCTTGTTT AGCAACCGAT
GTGGGTGCAG ATGGCGAAGT TTTAGAGAAA GGGGCTGGTG TAGTTATGAA TACCAAAACT
GTGCGATCGC AATTACGCAC CCTTTTACCA CTATTCCAAG ACCATCCAGA GTTAACAACC
GTATTGGGAC AAAAAGCCAG AAAGCGGGTA GAAGAACGCT ACACACTAGA TAAGAACATT
ACTCATTTAG AAGAACTTTA TCGTGAAGTT TTAGCACAGC AACCAGTAAA ACTCAGTTGG
GGAGCTTAA
 
Protein sequence
MRIAWIGKKS PFCGNVTYSR EVTNALLDRG HEVSFLHFAQ EETEPDNWPK FQEVPLPFIY 
KSQVYTIPTF KATKVLTDSL REIKPDIVHA SLTLSPLDFF LPEICDQLNL PLIATFHTPF
AGKGAKLISG TQLLAYQLYA PFLGNYDRVI VFSQIQRELL ASMGVREKNI AVIPNGVDTS
KYSPGSSAVK TEFQAERLFV YQGRIAPEKN VESLLRAWKQ ANMGADSKLL MVGDGPLRAT
LEPFYGSEYG IIWLGFVADE DRRIQILQGA DVFILPSLVE GLSLSLLEGM ACGLACLATD
VGADGEVLEK GAGVVMNTKT VRSQLRTLLP LFQDHPELTT VLGQKARKRV EERYTLDKNI
THLEELYREV LAQQPVKLSW GA