Gene Ava_0722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0722 
Symbol 
ID3679377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp892703 
End bp894397 
Gene Length1695 bp 
Protein Length564 aa 
Translation table11 
GC content44% 
IMG OID637716050 
ProductABC transporter-like 
Protein accessionYP_321241 
Protein GI75906945 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.112137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.972889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGAT TAGAACATAT TAGTAAAATT TATCCTACAG GCGAAGTTCT CAAAGATATC 
AACTGGGAAG TGAAACCAGG CGATCGCATT GGTTTAGTCG GTGTCAACGG TGCGGGAAAA
TCAACTCAGC TAAAAATTAT TACTGGGGAG ATAGAACCGA CGGCTGGGGA AATTATTCGT
CCTGCTAGCC TGCACATAGC CTATCTTAAC CAAGAGTTTG AGGTAGATCC AAGCCGCACC
GTCAGAGAAG AATTTTGGAC TGTATTTAAG GAAGCTAACC AAGTACAGTT AGCTTTAACC
CAAGTGCAAC ATGATATGCA AACAGCGACT CCAGAGGAAC TGGATAAGCT AATCGACAAA
TTGGATCGTT TGCAGCGTCA GTTTGAAGGT TTGGATGGCT ATGGTTTGGA AGCACGCATA
GGGAAGATTC TCCCAGAAAT GGGATTTGAG CAAGAAGATG GCGATCGCCT CGTCAGCGCT
TTCTCTGGTG GCTGGCAAAT GCGGATGAGT TTGGGGAAGA TTCTTCTGCA AGCACCAGAT
ATCTTACTGC TGGACGAACC GACTAACCAC TTAGATTTAG AAACTATTGA GTGGTTAGAA
AATTATCTGA AAAAGCTAAC CACACCGATG GTCATAGTCT CCCATGACCG GGAGTTCCTT
GACCGCCTCT GCACCCAAAT TGTGGAAACT GAACGCGGTG TTTCTAGTAC TTACCTTGGT
AACTACACAT CGTATCTAGA ACAAAAAGCC GAAAGCCAAC TAGCACAATT GAGTGCTTAC
GAACGCCAGC AGAAAGAAAT CGAGAAACAG CAAGCATTTG TTGATAGATT CCGCGCCAGT
GCTACCCGCA GCACTCAAGC CAAAAGCCGA GAGAAGCAAC TAGATAAAAT CGAACGCATC
GAAGCGCCTG TGGCTGGTGT AAGAACCTTG CATTTCCGCT TTCCCCCCGC ACCCCGTAGT
GGACGTGAGG TAGTGAAAAT CAAGGATTTA ACTCATACCT ACGATGATAA GATTTTGTTC
TTGGGTGCGA ACCTCTTAAT TGAAAGAGGC GATCGCATCG CTTTCTTAGG CCCCAACGGT
GCAGGTAAAT CTACCCTGTT GCGGATAATT ATGGGTTTAG AACCACCTAC AGAAGGTAGC
GTGGGTATAG GGGAACACGG TGTGATTCCT GGTTACTTTG AGCAAAATCA AGCCGAAGCT
TTGGACTTGA AAAAAACTGT TATGGAAACT ATCCATGATG AAGTCCCTGA CTGGAAAAAT
GAAGAAGTCC GCACGCTTTT GGGTAAGTTT CTGTTTACGG GAGACACCGT ATTTAAACAA
GTAGAAGCAT TGAGTGGTGG AGAAAAGGCG CGACTAGCAT TAGCGAAAAT GCTTTTACGT
CCTGCCAACT TAATTATTCT CGATGAGCCT ACTAACCACC TAGATATTCC CGCAAAAGAA
ATGCTGGAAG AAGCACTACG AAATTATGAT GGTACGGCGA TAGTAGTTTC TCACGACCGT
TATTTTATTT CTCAAGTAGC CAACAAAATT GTTGAAATTC GGGATGGTGA ATTCCGAGTT
TATCTAGGTG ATTACCACTA TTATTTGGAT AAAATCGCTG AGGAAAAAGA AACGGCAAGG
TTAGAGGCGA TCGCTGCTGA AAAAGCTGCG AAAAAAGCCG CTAAATCAGC TAAATCTTCC
GCTAAGAAGA AGTAA
 
Protein sequence
MLRLEHISKI YPTGEVLKDI NWEVKPGDRI GLVGVNGAGK STQLKIITGE IEPTAGEIIR 
PASLHIAYLN QEFEVDPSRT VREEFWTVFK EANQVQLALT QVQHDMQTAT PEELDKLIDK
LDRLQRQFEG LDGYGLEARI GKILPEMGFE QEDGDRLVSA FSGGWQMRMS LGKILLQAPD
ILLLDEPTNH LDLETIEWLE NYLKKLTTPM VIVSHDREFL DRLCTQIVET ERGVSSTYLG
NYTSYLEQKA ESQLAQLSAY ERQQKEIEKQ QAFVDRFRAS ATRSTQAKSR EKQLDKIERI
EAPVAGVRTL HFRFPPAPRS GREVVKIKDL THTYDDKILF LGANLLIERG DRIAFLGPNG
AGKSTLLRII MGLEPPTEGS VGIGEHGVIP GYFEQNQAEA LDLKKTVMET IHDEVPDWKN
EEVRTLLGKF LFTGDTVFKQ VEALSGGEKA RLALAKMLLR PANLIILDEP TNHLDIPAKE
MLEEALRNYD GTAIVVSHDR YFISQVANKI VEIRDGEFRV YLGDYHYYLD KIAEEKETAR
LEAIAAEKAA KKAAKSAKSS AKKK