Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0721 |
Symbol | prfA |
ID | 3679376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 890667 |
End bp | 891767 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637716049 |
Product | peptide chain release factor 1 |
Protein accession | YP_321240 |
Protein GI | 75906944 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000614625 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.652309 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAAT CATACCTGCT GGAGAAACTG AAATCCGTTG AACAAACCTT CAATGAATTA ACTCGTCGCC TAGCTGACCC TGATACTGCT AGAAACCCCG ATGAGTATCA AAAAATTGCC AAGTCTCGTT CTTCTCTAGA AGAAGTTGTC AATACTTATG AAACTTGGAA AATAGCCCAG GAAGAATTAA TAGGGGCGCG TCAAGTACTT AAAGAGTCAA ATAGCGATCC GGAGTTGCAA GAAATAGCAG CTTTGGAAGT AAATGAATTA GAAGAAAAAA TAAAATATCT AGAAACTCGC TTGAAGGTGT TACTTCTACC CCGTGACCCC AACGATGATA AAAACATCAT GTTGGAAATC CGTGCTGGTA CTGGTGGCGA TGAAGCGAGT ATTTGGGCTG GTGACTTACT GCGGATGTAT TCTCGCTATG CTGATACTCA AGGCTGGCGG GTGAAGTTGG TGAGTGAGTC CCTTGGGGAA ATGGGCGGCT TCAAAGAAGT GATTCTGGAA ATTCAAGGTG ACAGCGTTTA CAGTAAGCTG AAATTTGAAG CAGGTGTTCA TAGGGTGCAG CGTGTACCAG CGACGGAAGC TGGGGGAAGG GTACATACTT CAACTGCAAC CGTGGCAATT ATGCCAGAAG TGGATGAGGT TGAAATCCAC ATTGACCCGA AAGATATTGA AATGACTACG GCTCGTTCTG GTGGTGCTGG TGGACAAAAC GTCAACAAGG TGGAAACTGC TGTTGACTTA ATGCACAAAC CGACGGGAAT ACGAATTTTC TGCACAGAAG AACGCAGTCA GTTGCAAAAC AAAGAACGGG CGATGCAGAT TCTGAGGGCG AAGTTGTATG AGATAAAGCT GCGCGAACAA CAAGAAGAAG TTACCTCGAT GCGGCGATCG CAAGTTGGAA CAGGATCGCG ATCTGAGAAA ATTCGCACTT ATAATTATAA AGATAGCCGT GCCACTGACC ACCGTTTAGG TCAAAACTTT TCGCTGAACC CTGTTTTGGA AGGCGATTTA GAAACGGTCA TCCAATCTTG TATTTCTCAA GACCAGCAAG AACGGTTGGC AGAGTTAGCA ACTTCTAGTG CTGCTGGTTA A
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Protein sequence | MAESYLLEKL KSVEQTFNEL TRRLADPDTA RNPDEYQKIA KSRSSLEEVV NTYETWKIAQ EELIGARQVL KESNSDPELQ EIAALEVNEL EEKIKYLETR LKVLLLPRDP NDDKNIMLEI RAGTGGDEAS IWAGDLLRMY SRYADTQGWR VKLVSESLGE MGGFKEVILE IQGDSVYSKL KFEAGVHRVQ RVPATEAGGR VHTSTATVAI MPEVDEVEIH IDPKDIEMTT ARSGGAGGQN VNKVETAVDL MHKPTGIRIF CTEERSQLQN KERAMQILRA KLYEIKLREQ QEEVTSMRRS QVGTGSRSEK IRTYNYKDSR ATDHRLGQNF SLNPVLEGDL ETVIQSCISQ DQQERLAELA TSSAAG
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