Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0718 |
Symbol | rplM |
ID | 3679373 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 889353 |
End bp | 889808 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637716046 |
Product | 50S ribosomal protein L13 |
Protein accession | YP_321237 |
Protein GI | 75906941 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0102] Ribosomal protein L13 |
TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000264986 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.589192 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAA CCTATCTTCC TCCTCAAGAA TCCCTTGAGC GTGATTGGTA CGTAGTAGAT GCTACGGACA AACGCCTGGG TCGCCTTGCC AGTGAAATTG CCATGATTTT AAGAGGCAAA AATAAGGCAC ACTACACCCC ACACCTAGAT ACAGGTGACT TCGTGATTGT TGTAAATGCT GAAAAAGTAG CAGTTACAGG CAAGAAACGT ACTCAGAAGC TTTACCGTCG TCACTCTGGT CGTCCAGGTG GGATGAAAAC AGAAACCTTT GCTAAACTGC AACAGCGCTT ACCAGAAAGA ATCGTGGAAC ACGCTGTCAA AGGTATGCTA CCCAAAAATA GCCTGGGTAA GCAGTTGTTT ACCAAACTGA AAGTTTACGC TGGGCCGACT CATCCCCACG ATGCCCAAAA ACCTAAAGAA CTAAACATTA ATACAATCCC TGGAGCAGAA AGTTAA
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Protein sequence | MSKTYLPPQE SLERDWYVVD ATDKRLGRLA SEIAMILRGK NKAHYTPHLD TGDFVIVVNA EKVAVTGKKR TQKLYRRHSG RPGGMKTETF AKLQQRLPER IVEHAVKGML PKNSLGKQLF TKLKVYAGPT HPHDAQKPKE LNINTIPGAE S
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