| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0716 |
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| Symbol | rplQ |
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| ID | 3679371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 887997 |
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| End bp | 888347 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637716044 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_321235 |
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| Protein GI | 75906939 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000127542 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTCACC GGAATCGGGT CAAAAAACTT GGTAAACCAG CTGATCAGCG CCGCGCCCTG
TTACGAGCGT TGACTACTGA ACTCATCCGT CATGGTCGGA TTACCACTAC TTTGGTGCGT
GCAAAAGTGG TACGAAGCGA AGTAGATAAA ATCATCACCC TAGCAAAAGA TGGCTCATTA
GCAGCACGTC GTCGAGCCTT GGGTTACATC TACGATAAAC AGCTAGTTCA TGCGCTGTTT
GAGCAAGTTT CTTCTCGGTA TGGTAATCGT CAAGGGGGAT ATACCCGTAT TCTGCATACC
GTACCTCGTC GGGGAGACAA TGCTGAGATG GCGATTATTG AATTGGTGTA G
|
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| Protein sequence | MRHRNRVKKL GKPADQRRAL LRALTTELIR HGRITTTLVR AKVVRSEVDK IITLAKDGSL
AARRRALGYI YDKQLVHALF EQVSSRYGNR QGGYTRILHT VPRRGDNAEM AIIELV
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