Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0699 |
Symbol | rpmC |
ID | 3678845 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 878748 |
End bp | 878972 |
Gene Length | 225 bp |
Protein Length | 74 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637716027 |
Product | 50S ribosomal protein L29 |
Protein accession | YP_321218 |
Protein GI | 75906922 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0255] Ribosomal protein L29 |
TIGRFAM ID | [TIGR00012] ribosomal protein L29 |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000396079 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACTTC CCAAAATTTC AGAAGCTAGA GAACTAAGTG ACGAGAGACT GGTTGAGGAA ATCACTGCTG TCAAAAAACA ACTGTTTCAG TTGCGCTTGC AAAAGGCCAC CAGACAACTA GACAAACCTC ACCAATTCCG CCATGCCCGC CACCGTCTAG CCCAATTGTT AACAGTAGAA GGAGAGCGGA AACGGGCAGC CGCAACTCAA TCGCCTCAAG AATAA
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Protein sequence | MPLPKISEAR ELSDERLVEE ITAVKKQLFQ LRLQKATRQL DKPHQFRHAR HRLAQLLTVE GERKRAAATQ SPQE
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