Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0612 |
Symbol | |
ID | 3678545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 768978 |
End bp | 770300 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637715940 |
Product | GAF sensor Signal transduction histidine kinase |
Protein accession | YP_321131 |
Protein GI | 75906835 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0127194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.714429 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTAAAG CCATTGATGA TGGAATTTTT TTGCAAAATC AAATGTGGCA ACGTGAGCGT CTGGCGATCG CTCTTTTATC ATCTTTAAAC TATCGGACTG GAGAACTAAG CGGCTATCTG TTTAACATTG CTTGTGGAGT CAGCAAGTTA CTCAATGTAG ATTGGTCGGT AGTCACATTG TGTCAACAAG GATTTGAGAA AGTCCTAGCC AGTAATATTA ATATGGGTGT AGGCGAACAC GTTTATTCAC TACATGGTTC CCTAACGAAC ACCGTTATAG AAACTGGTAA CTCCTTAGTA GTAGAAGATA CAAGTAAACA TCCAGAATAT GGTCAGCCTC CAGAAGGCTA CCGAGCTTAT TTAGGGATAC CGTTACGGAC TGCTGAAGGC GAAGTAATTG GTACTATTTG CTCATTTCAT CACGAATCAC GAGAGTTTAG TCCAGAAGAA ATCCAGTTTA CAGAATTATT TGCCGAACGT GCTGCTACAG CCATTGATAA TTATCGCTTA TATAAGGAGC AGTGCCAATT TAATCATATT TTGGAAGCGG AAGTAGAAAA ACGTACAGCA GAATTAAAAG CAACACAAAG CAAGCTTGTA GAAAAGGAAA GACTAGCAGC TATTGGTGAA TTTGCAGCCA TGATTGTGCA TGAAATTCGC AATCCTTTAA CTACAATGAT CATGGGATTA AAATATTCTC AAAAAACAAT TTTGTCATCA GATGCTCAAG AGCGATTATC ATTAGCAGTT AGTGAAGCTT GTCGCTTAGA TAATCTACTA AGTGAAATTT TGCTTTATGC AAAACCTCAA GTTTTACAAA TATGTGAATT AGAGGTTAAT AAATTTATTA GTGAGTTACT TATATTAGTG CGTCAAATGC CAGAAGCACT CTCACGTAAA ATCGAATTCA TTCCCTCATC AACTTCAGTT AAAATATTAG CAGATAAAGA TAAACTTAAA CAGTTATTTA TTAATACTAT CCGCAATGCC TGTGAGGCAA TTTCAGCCGG AGAGGTTGTT CAATGGGAAG TAAATATTTC ATCGCCAGAT GAAGTCTGTA TAAATATTTG TAATCGTGGT GAACCAATTC CCCCAGAGAT TTTATCAAAA TTAACTCAGC CATTCTTTTC TACAAAACCT CACGGCACTG GCTTAGGACT TGCCATTGTC CAACGCATCG TCCATGCTCA TTATGGGAAA TTATCTATTG AGTCTGATAT CACAAAAGGT ACTATAGTAA GTGTACGATT GCCTATAGCT ACTTTCCAGA CCCTGGGATA TTTTGAAGTT TATAAAGATT ATACTTACCA AGTAACTTCA TGA
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Protein sequence | MVKAIDDGIF LQNQMWQRER LAIALLSSLN YRTGELSGYL FNIACGVSKL LNVDWSVVTL CQQGFEKVLA SNINMGVGEH VYSLHGSLTN TVIETGNSLV VEDTSKHPEY GQPPEGYRAY LGIPLRTAEG EVIGTICSFH HESREFSPEE IQFTELFAER AATAIDNYRL YKEQCQFNHI LEAEVEKRTA ELKATQSKLV EKERLAAIGE FAAMIVHEIR NPLTTMIMGL KYSQKTILSS DAQERLSLAV SEACRLDNLL SEILLYAKPQ VLQICELEVN KFISELLILV RQMPEALSRK IEFIPSSTSV KILADKDKLK QLFINTIRNA CEAISAGEVV QWEVNISSPD EVCINICNRG EPIPPEILSK LTQPFFSTKP HGTGLGLAIV QRIVHAHYGK LSIESDITKG TIVSVRLPIA TFQTLGYFEV YKDYTYQVTS
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