Gene Ava_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0452 
Symbol 
ID3682457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp578403 
End bp579362 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content48% 
IMG OID637715781 
Productcysteine synthase 
Protein accessionYP_320973 
Protein GI75906677 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0031] Cysteine synthase 
TIGRFAM ID[TIGR01136] cysteine synthases
[TIGR01139] cysteine synthase A 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.118838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATTG CTAATGATGT AACAGAACTT ATTGGAGGTA CACCTTTAGT TAAGCTGAAT 
AAGATTCCGC AAGCGGAAGG AGTAGTTGCG AGAATAGTTG TCAAACTAGA AGGTATGAAT
CCAGCCTCTT CCGTAAAAGA CCGGATTGGG GTGAGTATGA TTAACTCAGC AGAAGCGGAA
GGTTTAATCA CACCGGGAAA AACTATTTTA GTAGAACCAA CTTCTGGTAA CACAGGAATT
GCTCTGGCAA TGGTAGCCGC CGCCCGTGGT TATCGGTTAA TTTTGACTAT GCCAGAAACC
ATGAGCCAAG AAAGACGGGC TATGTTGCGG GCTTATGGTG CAACTTTAGA GTTGACTCCA
GGTACGGAAG GTATGCGGGG AGCCATTCGC AAAGCTGAAG AACTTGTGGC TAGTACCCCT
GATGCTCATA TGTTGCAACA GTTTCGCAAC CCAGCTAACC CCAAAATCCA CCGCGAAACT
ACTGCTGAAG AAATTTGGAA TGATACCGAT GGTGAAGTTG ATATTGTAAT TGCTGGGGTG
GGTACTGGAG GAACGATTAC CGGGATTGCA GAGGTACTGA AGCAACGCAA ACCTAGTTTT
CAGGCGATCG CAGTTGAACC AAGCAATAGT CCTATCCTTT CCGGTGGACA AGCAGGGCCG
CACAAAATCC AAGGTATCGG CGCAGGCTTT GTTCCCGATG TCCTCCGCCT GGAATTGGTG
GATGAAGTCA TCAGGGTGAG TGATGATCAA GCGATGAGTT ACGGGCGGCG TTTAGCCAGG
GAAGAAGGTT TGTTATCTGG TATCTCCTCT GGTGCGGCTT TGTGTGCAGC TTTACAGGTG
GGGAAACGTC CCGAAAACGC CGGTAAGTTA ATTGTGATGG TTCAACCTTC CTTCGGCGAA
CGCTACCTCA GCACCCCTTT GTTTCAGGAT TTGACGAATG AAACTGCTGG CGTTCGGTAA
 
Protein sequence
MRIANDVTEL IGGTPLVKLN KIPQAEGVVA RIVVKLEGMN PASSVKDRIG VSMINSAEAE 
GLITPGKTIL VEPTSGNTGI ALAMVAAARG YRLILTMPET MSQERRAMLR AYGATLELTP
GTEGMRGAIR KAEELVASTP DAHMLQQFRN PANPKIHRET TAEEIWNDTD GEVDIVIAGV
GTGGTITGIA EVLKQRKPSF QAIAVEPSNS PILSGGQAGP HKIQGIGAGF VPDVLRLELV
DEVIRVSDDQ AMSYGRRLAR EEGLLSGISS GAALCAALQV GKRPENAGKL IVMVQPSFGE
RYLSTPLFQD LTNETAGVR