Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0439 |
Symbol | |
ID | 3682600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 559514 |
End bp | 560701 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637715768 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_320960 |
Protein GI | 75906664 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.63616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.246841 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATAT TGGTACTAAG TTGGGAATTT CCACCGAGAA TAGTTGGCGG TATTGCTCGT CATGTGGCGG AACTATATCC TGAACTGGTA AAGCTAGGGC ATGAAATCCA TCTAATTACG GTAGAAGTTG GTCAAGCATC GATGTACGAA GTCGTGGAGG GAATACACGT ACATCGAGTA CCAGTTTCTC ATAGTAATGA CTTTTTTCAC TGGGTAGTTA ATCTGAACCA AAGCATGGGA CATCACGGTG GGAAGTTAAT TACGGAGGAA GGGCCGTTTG ATTTAATCCA TGCCCATGAT TGGCTAGTGG GAGATGCAGC GATCGCTCTT AAGCATAACT TTAAAATTCC CCTGATTGCT ACTATCCACG CCACAGAATA CGGACGCTAC AACGGGATTC ACAACGACAC CCAACGCTAC ATTCACGACA AAGAAAACCT ACTCGCCTAC AACGCCTGGC GAATTATCGT CTGTACCAAC TATATGCGCC AAGAAGTAGG GCGCACCCTA GAAAGTCCCT GGGATAAAAT CGATGTGATT TATAACGGTA TTCGACCAGA AAAGAAACAG CACCACGAAG ATTTTCATGC TCAAGATTTT CGTCGTCAAT TTGCCGAAGA CCATGAGAAG ATTGTCTACT ATGTTGGTCG CATGACTTAT GAAAAAGGTG TATCAAATTT AATCAATGCA GCCCCCAAAG TCCTATCAGA AATGGGCGGC TACGTAAAAT TTGTGATTGT TGGTGGTGGT AATACTGACA ATCTTAAACG TCAGGCTTGG GATTTAGGAA TTTGGCACAA ATGTTACTTT ACCGGTTTTC TTTCCGATGA GTATTTGGAC AAATTCCAAA CTGTGGCTGA TTGTGCAGTA TTTCCTAGTC TTTACGAACC CTTTGGGATT GTAGCTTTAG AAAGCTTCGC CTCGCGGGTT CCCGTAGTGG TGTCCGATAC AGGCGGCTTC CCTGAAGTAG TGCAGCATAC CCGAACAGGT ATCGTAACTT GGGTGAATAA CCACGATTCT TTGGCTTGGG GAATTCTAGA AGTTTTGAAA AATCCGGGTT ATAGTCAATG GCTGATTGAT AACGCCTATA AGGATTTGGA ACACCGCTTT AGCTGGCCGA AATTAGCCCA ACAAACCCAA GCTGTTTATC AACGAGTGGT GAAAGAGCGA TCGCAAGTTG AATGGTAA
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Protein sequence | MKILVLSWEF PPRIVGGIAR HVAELYPELV KLGHEIHLIT VEVGQASMYE VVEGIHVHRV PVSHSNDFFH WVVNLNQSMG HHGGKLITEE GPFDLIHAHD WLVGDAAIAL KHNFKIPLIA TIHATEYGRY NGIHNDTQRY IHDKENLLAY NAWRIIVCTN YMRQEVGRTL ESPWDKIDVI YNGIRPEKKQ HHEDFHAQDF RRQFAEDHEK IVYYVGRMTY EKGVSNLINA APKVLSEMGG YVKFVIVGGG NTDNLKRQAW DLGIWHKCYF TGFLSDEYLD KFQTVADCAV FPSLYEPFGI VALESFASRV PVVVSDTGGF PEVVQHTRTG IVTWVNNHDS LAWGILEVLK NPGYSQWLID NAYKDLEHRF SWPKLAQQTQ AVYQRVVKER SQVEW
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