Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0378 |
Symbol | dnaK |
ID | 3682713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 491617 |
End bp | 493578 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637715706 |
Product | molecular chaperone DnaK |
Protein accession | YP_320899 |
Protein GI | 75906603 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAG TTATTGGGAT CGACTTAGGC ACGACAAATA GTTGTGTTGC GGTTTTGGAA GGTGGTCAAC CGATAGTGAT CGCTAATTCT GAAGGCGGAA GAACTACACC AAGTATTGTG GGGTTTGGCA AAAGTGGCGA TCGCTTGGTC GGTCAACTAG CAAAACGCCA AGCTGTAACT AATGCCGAAA ATACGATTTT TAGTATTAAA CGGTTTATCG GTCGTCGTTG GGAAGATACA GAAATAGAAC GCGATCGTGT ACCTTATGGT TGTGTCAAAG GTCGAGACGA TACTGTTGAT GTGCAGATTC GTGGACGCAA TTACACGCCT CAAGAAATAT CTGCTATGGT TCTGCAAAAA CTTAAGCAAG ATGCAGAAAA TTTTTTGGGT GAAGCAGTTA CACAAGCAGT AATTACCGTA CCTGCCTATT TTACTGATGC TCAAAGACAA GCCACTAAAG ATGCTGGTAC TATTGCCGGG CTGGAAGTCT TACGAATTAT CAATGAACCA ACGGCTGCGG CTTTAGCTTT TGGACTAGAA AAGCAAGATC AAGAGCAGCT AATTTTAGTT TTTGACTTGG GCGGCGGAAC TTTTGACGTA TCAATCCTCC AATTAGGGGA CGGTGTATTT GAAGTCAAAG CCACCGGTGG TAATAATCAA TTAGGCGGTG ATGACTTTGA CGGCTGTGTC GTGTGTTGGA TGATTGAACG CTTCCAACAA CAGGAAAAAA TCGACCTAGC CCAAGATAAG ATGGCGCTGC AACGCTTACG AGAAGCAGCC GAGAAAGCCA AAATTGAACT CTCCAGCATG GCAAGTACCT CCATTAACTT GCCTTTTATT ACGGCTGATG AAACTGGACC CAAGCATCTA GAAATGGAAC TTAGCCGTTC TAAGTTTGAA GAGTTGGTAG GGCAGTTAAT TGAAGCTACC ATCCAGCCAA TGATTCAAGC CCTCAAAGAT GCAGACCTGA AACCACAAGA TATAGATAAG ATTATTTTGG TGGGTGGTTC TACCCGTATT CCGGCGGTGC AGAATGCCTT AATCAAGTTT TTTAATGGTA AAGCCCCAGA CCGTTCTGTT AATCCGGATG AAGCCGTAGC ACTGGGTGCA GCAATTCAAG CTGGGGTACT AGGTGGCGAA GTTGATAATC TCCTACTACT AGATGTCACA CCTTTATCTC TAGGGATTGA AACTTTAGGA GAAGTATTCA CCAAAATCAT TGAACGTAAC ACCACAATTC CTACTAGCAA ATCTCAAATA TTTTCCACTG CTGTGGATGG TCAAACCTCG GTAGAAATCC ACATCCTCCA AGGTGAACGG ACAATGGCAC GGGATAACAA GAGCTTAGGC AAATTTCTTT TGGCAGGCAT TCCCCCAGCA CCCCGTGGAG TCCCACAAAT CGAAGTTTCC TTTGAAATTG ATGTCAACGG CATTCTCAAA GTTGCTGCTC AAGATAAAGG CACAGGCAGA GAACAAAGTA TTAGAATTAC TAATACTGGT GGATTAAGTA CCAATGAAGT GGAAAGAATG CGGCAAGAAG CAGAAGTTTT TGCCGAAGAA GATAGAAGAC GCAAAGAACT GGTCGAACTA AAAAATCAAG CAGATAATTT GTTGATTATT TATGAATCTA CCTTAAAAGA CAATGGTGAA TTAATTGGAG AACAAATAAA AGTTCTAGCC AACGAAAAAG TTGCACAAAT TCAGAGTGTA ATGACTAATC CTGCCATTTC CCTGAAAGAG TTTCAACAAT GTTTAGATGA TTTCCAACAA ACCCTCTTTT CTATCGGTGC TAATGTTTAC CAACGAGCTA ACACTCAAAC CGATGATGAA GTAGAGGTAA TATCTGATAG TTCATCACCT TTAGATATAG AACACCCCAT CAGTGGAACC TTAATACCAC AATTTAACTT TGATTTTGAT GATGAAAGTA CAGCACAAGC TGATTATGAA GCGATAGATT AG
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Protein sequence | MGKVIGIDLG TTNSCVAVLE GGQPIVIANS EGGRTTPSIV GFGKSGDRLV GQLAKRQAVT NAENTIFSIK RFIGRRWEDT EIERDRVPYG CVKGRDDTVD VQIRGRNYTP QEISAMVLQK LKQDAENFLG EAVTQAVITV PAYFTDAQRQ ATKDAGTIAG LEVLRIINEP TAAALAFGLE KQDQEQLILV FDLGGGTFDV SILQLGDGVF EVKATGGNNQ LGGDDFDGCV VCWMIERFQQ QEKIDLAQDK MALQRLREAA EKAKIELSSM ASTSINLPFI TADETGPKHL EMELSRSKFE ELVGQLIEAT IQPMIQALKD ADLKPQDIDK IILVGGSTRI PAVQNALIKF FNGKAPDRSV NPDEAVALGA AIQAGVLGGE VDNLLLLDVT PLSLGIETLG EVFTKIIERN TTIPTSKSQI FSTAVDGQTS VEIHILQGER TMARDNKSLG KFLLAGIPPA PRGVPQIEVS FEIDVNGILK VAAQDKGTGR EQSIRITNTG GLSTNEVERM RQEAEVFAEE DRRRKELVEL KNQADNLLII YESTLKDNGE LIGEQIKVLA NEKVAQIQSV MTNPAISLKE FQQCLDDFQQ TLFSIGANVY QRANTQTDDE VEVISDSSSP LDIEHPISGT LIPQFNFDFD DESTAQADYE AID
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