| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0376 |
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| Symbol | |
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| ID | 3682711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 488175 |
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| End bp | 490187 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637715704 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_320897 |
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| Protein GI | 75906601 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTACT CGTCACCACA ACGGCGCAGT ACCGCTCTTA CTACAAGAAC AGAGTTTTCA
CCTTTCGGTA ATAAGCTAGT GCAGTCTGGC TACATTAACA CCGAACAGAT GAGACAGGCG
CTGATTGAAA GTCGCAAGTC TGGTAGACCC TTAACAGAAG TTTTGGAGTC AATTACTGGG
CGACAATTAT CACCTGAGTA CCTCAGGCAG TACAAGAAAC AACAATTATT TGAACTGAAA
ATACTATACG GTGTTGAATA CCTCGATCCG GAGGTCAACG ATATCGGTAG CACGATGGTG
GGTAATTTAA TTGAAACCCT CATCCCAGTT GATATCTGCC GTCGTCATCG TTTAGTACCA
CTATCTAAAA ATGATGAACA CACCCCGCCT TATGTTTTAG TGGCGATGGT TGCTCCGGAT
AACTTGGAAG CGTCGGACGA CCTAAACCGC ATCTTGCGCC CCCAAGGTTT AACATTACAG
CGTATGGTAA TTACCCAGGA GGATTACCAA CGGCTAATTA ACCAATATTT GGATGAATTG
GCTGTGCGGC AAAAGCACCT GGAACAAGAA AAATTTACAG ATATTAATCA GGATTTAGAA
AATCTTGGCA ATCTCGACCT AGAAGATGCT CCTGAAGAGA TGGAGGCTGA TTTAGGTTCA
GCGATGAAGG GTGCAGAAGA TGCACCTGTC ATCAACCTCG TTAACAGAAT TTTAGCGAAG
GCGTTGCATG ACAAGGTTTC TGATATCCAC ATTGAACCCC AAGAAGAAAA TCTGCGGATT
CGCTTCCGCA AGGATGGGGT ACTGCGGGAG GCTTTTGACC CCTTACCGAA AAAAATTATT
CCGGCTGTAA CAGCCAGATT TAAAATTATC TCCAATTTGG ATATTGCCGA GCGACGTTTA
CCGCAAGATG GACGCATCCG CCGGATGTTT GAGGGACGTA AAGTAGACTT CCGCGTGAAT
ACCTTACCCA GTCGCTATGG GGAAAAGGTA GTACTGCGGA TTTTGGACAA CTCTTCTACG
CAACTGGGAC TGAATAAGTT AATTACTGAC CCAGAAACAT TGCAGATTGT CCAAGATATG
GTGAGTAAGC CTTTCGGTTT AATTTTGGTA ACTGGGCCAA CTGGTTCAGG TAAGACAACT
TCCTTATATT CAGCACTGGC GGAGAAGAAC TCACCAGGTA TTAATATCAG TACGGTAGAA
GACCCAATTG AGTACAGTTT GCCAGGGATT ACCCAGGTAC AGGTAATTAG AGAAAAAGGG
CTAGATTTTG CGACGGCATT ACGGGCTTTT TTGCGACAAG ACCCCGATGT GTTGCTGGTG
GGTGAAACAA GAGACAAAGA AACAGCGAAA ACAGCGATTG AAGCGGCTTT AACAGGTCAC
TTGGTATTAA CTACATTACA CACCAACGAT GCCCCTGGTG CGATCGCTCG TTTGGGTGAA
ATGGGTATTG AACCATTCAT GGTTTCCAGT TCTCTGATTG GGGTATTGGC ACAACGTTTA
GTGCGCCGTG TTTGTGGTGA GTGCCGTATT GCTTACACTC CCACCACTGA GGAGTTAGCT
CGTTATGGCA TGACGGCTTC TCAAGAAGTG TCTGTCACCT TCTATAAAGC TAACACCATC
CCCGCAGAAG CGATCGCCGA GGCCAAAGCG AAAAACCAGC TTTGTCCAGC TTGTAACGGT
GTTGGCTACA AAGGACGCTG TGGTGTTTAT GAAGTGATGC GGGTTACAGA GAACCTACAA
ACTTTAATCA ACGAAGAAGC ACCAACAGAA CGCATCAAAG AAGTAGCTGT AGAAGAAGGG
ATGAAAACCT TATTAGCTTA TAGCTTAGAC CTCGTTCGCC AAGGTGCTAC CACCCTAGAA
GAAGTGGAAC GGGTGACATT TACAGACACA GGTTTAGAAG CTGAATTAAA AGCTAAACGC
AAGACTGGTC TTACCTGCCG GACTTGCAGC GCCATATTAC AACCAGAATG GCTAGATTGT
CCCTACTGTC TAACAGCCCG TTTTGAAGAT TAG
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| Protein sequence | MTYSSPQRRS TALTTRTEFS PFGNKLVQSG YINTEQMRQA LIESRKSGRP LTEVLESITG
RQLSPEYLRQ YKKQQLFELK ILYGVEYLDP EVNDIGSTMV GNLIETLIPV DICRRHRLVP
LSKNDEHTPP YVLVAMVAPD NLEASDDLNR ILRPQGLTLQ RMVITQEDYQ RLINQYLDEL
AVRQKHLEQE KFTDINQDLE NLGNLDLEDA PEEMEADLGS AMKGAEDAPV INLVNRILAK
ALHDKVSDIH IEPQEENLRI RFRKDGVLRE AFDPLPKKII PAVTARFKII SNLDIAERRL
PQDGRIRRMF EGRKVDFRVN TLPSRYGEKV VLRILDNSST QLGLNKLITD PETLQIVQDM
VSKPFGLILV TGPTGSGKTT SLYSALAEKN SPGINISTVE DPIEYSLPGI TQVQVIREKG
LDFATALRAF LRQDPDVLLV GETRDKETAK TAIEAALTGH LVLTTLHTND APGAIARLGE
MGIEPFMVSS SLIGVLAQRL VRRVCGECRI AYTPTTEELA RYGMTASQEV SVTFYKANTI
PAEAIAEAKA KNQLCPACNG VGYKGRCGVY EVMRVTENLQ TLINEEAPTE RIKEVAVEEG
MKTLLAYSLD LVRQGATTLE EVERVTFTDT GLEAELKAKR KTGLTCRTCS AILQPEWLDC
PYCLTARFED
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