Gene Ava_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0259 
Symbol 
ID3682946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp331137 
End bp333146 
Gene Length2010 bp 
Protein Length669 aa 
Translation table11 
GC content45% 
IMG OID637715587 
Producthypothetical protein 
Protein accessionYP_320780 
Protein GI75906484 
COG category[S] Function unknown 
COG ID[COG1649] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.27195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATCTA CTACTACACG TTTCTCCGAT ATTCCTAACC ATTGGGCGCG TCCGTTCATC 
GAAGCTTTGG CAGCAAGACG GATTTTAAAT GGCTATCCTG ATGGAACTTT TCGCCCTAAT
AATTCAGTTA CCCGTGCTGA GTTCGCCGCT ATAGTTGCAG CCGTATTTAA TATATCTGTA
AAACGTCCGT ACATTAATTT TACTGACGTA CCGACAAGTA ATTGGGCAGC AAATGCCATC
AAAAAAGCTT ACGAAACCGG ATTCTTGAGT GGTTTCCCCG ATAAAACCTT TCGCCCTGGT
AATCAAATCT CTAGGGGGGA TATCTTAGTA TCTCTAGTCA ATGGATTGGA AATAGCCACG
AAGATTAAAC CGGATTTACT AGAAAAATTA CCGGAAATTT ATCAAGATGC GGGTAATATA
CCAGCTTATG GCAGAAATCA AATTGCGATC GCCACTAGTG CAGGTTTAGT CTCCAGTTTT
CCCAATATCA AATCACTTAA CTTCACTACT GCGGCTACTC GTGGTGATGT GGCCGCAATT
ATTTATCAAG CTTTAGTTTA TCTTGGTCAG GCAGAAAAGA TCGCCTCTGT TTACTTGGTG
ATACCCCCAA AACCCACATT ACCCACCGTA CGGGTAAGCC ATAACAGAGA GTTCCGGGGG
GCTTGGATAA CCACAGTATG GAATAGTGAC TGGCCTTCCA AAGCTGGACT TTCTGTAGCT
CAACAGCAGG CTGAATTAGT GGCAATTCTT ACCCGTCTCC AAGAGTTGAA TTTCAACGCC
GTAATTTTGC AAGTGCGACC AGAAGGAGAT GCTTTATATG CGTCTGAGTT AGAACCTTGG
AGTGCTTGGC TGACAGGGAC TCCAGGCAAA GCTCCAGAAC CATTTTACGA TCCATTGCAG
TTTGCGATCG CCGAAGCCCA TAAACGCAAC CTAGAAGTTC ATGCTTGGTT CAACCCCTAC
CGCGCCAAAA CCAGCACCAA AAGCGCGCCT AACGTTCGTC CCCACATCTC CGTAACCAAT
CCAGAAGTAG TCTATCAATG GGGTAATCAA CTGTGGATGG ACCCAGGGAT AAAAATTGTC
CAAGATAGGG CTTACAACGT CATCATTGAT GTTGTTCGCC GTTATGACAT AGATGCAGTC
CACCTCGATG ATTACTTCTA TCCCTATCCC ATTCAAGGCC AGGCTTTCCC CGATGATAAA
ACCTATGCTG CCTATAAATC AGTAGGTGGA CAACTGAACT TAAACGACTG GCGACGGCAA
AACGTTGATC AAATGGTGTT GCGTCTGTCT CAAGGCATCA AAGCGACAAA ATCTTACGTT
AAATTTGGTA TCAGCCCCTT TGGCATTTAT CGCCCCGGAC AACCACCAGG AATCACAGGC
TTAGATGCCT ATAGTGTACT ATATGCTGAT GCCAAGAAAT GGTTAGAGCA AGGCTGGGTG
GATTATCTAG CACCGCAACT ATATTGGCGT ACTGACCAAA CCAGCCAGAG TTATCCCGTA
TTGCTGAAAT GGTGGACAGA AATTAATTCT AAGCGGCGAC ACATTTACGC AGGTAACAAT
ATTGGACAAC TTGACGGCAA AGCTTGGAAA AATGAAGAGA TAGAAAAACA AGTCAAAATC
AGCCGCAATC AAGCCGGAGA ATTATCTCTG GGCAATATCT TTTTTAGCGT CAGTTCTATT
ATTGAAAATC GCCAGGATAT CTCAGCAACT TTCCAAAATT CACTTTATAC TACACCTGCC
ATAGCACCTG CTATGCCTTG GCAGACTGCA ACTACACCAC CTGCACCAAA AGAACTGCAA
GTCAACAACC GCAGACTCAG TTGGCAACCA GGAGATAATC AACCCGTCCG TTCTTGGACA
CTTTATCGTC AAACTGGCAG TAATTGGATA CTACAGCGAG TCTTGTCTGC TGGGACAACC
TTCGCCACAG TCCAACCAGG AACCTATGCT GTCTGTGCAG TAGACCGATT AGCAAATGAG
AGCCAGGGTG TAATCATTAA CGTTAGTTGA
 
Protein sequence
MVSTTTRFSD IPNHWARPFI EALAARRILN GYPDGTFRPN NSVTRAEFAA IVAAVFNISV 
KRPYINFTDV PTSNWAANAI KKAYETGFLS GFPDKTFRPG NQISRGDILV SLVNGLEIAT
KIKPDLLEKL PEIYQDAGNI PAYGRNQIAI ATSAGLVSSF PNIKSLNFTT AATRGDVAAI
IYQALVYLGQ AEKIASVYLV IPPKPTLPTV RVSHNREFRG AWITTVWNSD WPSKAGLSVA
QQQAELVAIL TRLQELNFNA VILQVRPEGD ALYASELEPW SAWLTGTPGK APEPFYDPLQ
FAIAEAHKRN LEVHAWFNPY RAKTSTKSAP NVRPHISVTN PEVVYQWGNQ LWMDPGIKIV
QDRAYNVIID VVRRYDIDAV HLDDYFYPYP IQGQAFPDDK TYAAYKSVGG QLNLNDWRRQ
NVDQMVLRLS QGIKATKSYV KFGISPFGIY RPGQPPGITG LDAYSVLYAD AKKWLEQGWV
DYLAPQLYWR TDQTSQSYPV LLKWWTEINS KRRHIYAGNN IGQLDGKAWK NEEIEKQVKI
SRNQAGELSL GNIFFSVSSI IENRQDISAT FQNSLYTTPA IAPAMPWQTA TTPPAPKELQ
VNNRRLSWQP GDNQPVRSWT LYRQTGSNWI LQRVLSAGTT FATVQPGTYA VCAVDRLANE
SQGVIINVS