Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0259 |
Symbol | |
ID | 3682946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 331137 |
End bp | 333146 |
Gene Length | 2010 bp |
Protein Length | 669 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637715587 |
Product | hypothetical protein |
Protein accession | YP_320780 |
Protein GI | 75906484 |
COG category | [S] Function unknown |
COG ID | [COG1649] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.27195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTATCTA CTACTACACG TTTCTCCGAT ATTCCTAACC ATTGGGCGCG TCCGTTCATC GAAGCTTTGG CAGCAAGACG GATTTTAAAT GGCTATCCTG ATGGAACTTT TCGCCCTAAT AATTCAGTTA CCCGTGCTGA GTTCGCCGCT ATAGTTGCAG CCGTATTTAA TATATCTGTA AAACGTCCGT ACATTAATTT TACTGACGTA CCGACAAGTA ATTGGGCAGC AAATGCCATC AAAAAAGCTT ACGAAACCGG ATTCTTGAGT GGTTTCCCCG ATAAAACCTT TCGCCCTGGT AATCAAATCT CTAGGGGGGA TATCTTAGTA TCTCTAGTCA ATGGATTGGA AATAGCCACG AAGATTAAAC CGGATTTACT AGAAAAATTA CCGGAAATTT ATCAAGATGC GGGTAATATA CCAGCTTATG GCAGAAATCA AATTGCGATC GCCACTAGTG CAGGTTTAGT CTCCAGTTTT CCCAATATCA AATCACTTAA CTTCACTACT GCGGCTACTC GTGGTGATGT GGCCGCAATT ATTTATCAAG CTTTAGTTTA TCTTGGTCAG GCAGAAAAGA TCGCCTCTGT TTACTTGGTG ATACCCCCAA AACCCACATT ACCCACCGTA CGGGTAAGCC ATAACAGAGA GTTCCGGGGG GCTTGGATAA CCACAGTATG GAATAGTGAC TGGCCTTCCA AAGCTGGACT TTCTGTAGCT CAACAGCAGG CTGAATTAGT GGCAATTCTT ACCCGTCTCC AAGAGTTGAA TTTCAACGCC GTAATTTTGC AAGTGCGACC AGAAGGAGAT GCTTTATATG CGTCTGAGTT AGAACCTTGG AGTGCTTGGC TGACAGGGAC TCCAGGCAAA GCTCCAGAAC CATTTTACGA TCCATTGCAG TTTGCGATCG CCGAAGCCCA TAAACGCAAC CTAGAAGTTC ATGCTTGGTT CAACCCCTAC CGCGCCAAAA CCAGCACCAA AAGCGCGCCT AACGTTCGTC CCCACATCTC CGTAACCAAT CCAGAAGTAG TCTATCAATG GGGTAATCAA CTGTGGATGG ACCCAGGGAT AAAAATTGTC CAAGATAGGG CTTACAACGT CATCATTGAT GTTGTTCGCC GTTATGACAT AGATGCAGTC CACCTCGATG ATTACTTCTA TCCCTATCCC ATTCAAGGCC AGGCTTTCCC CGATGATAAA ACCTATGCTG CCTATAAATC AGTAGGTGGA CAACTGAACT TAAACGACTG GCGACGGCAA AACGTTGATC AAATGGTGTT GCGTCTGTCT CAAGGCATCA AAGCGACAAA ATCTTACGTT AAATTTGGTA TCAGCCCCTT TGGCATTTAT CGCCCCGGAC AACCACCAGG AATCACAGGC TTAGATGCCT ATAGTGTACT ATATGCTGAT GCCAAGAAAT GGTTAGAGCA AGGCTGGGTG GATTATCTAG CACCGCAACT ATATTGGCGT ACTGACCAAA CCAGCCAGAG TTATCCCGTA TTGCTGAAAT GGTGGACAGA AATTAATTCT AAGCGGCGAC ACATTTACGC AGGTAACAAT ATTGGACAAC TTGACGGCAA AGCTTGGAAA AATGAAGAGA TAGAAAAACA AGTCAAAATC AGCCGCAATC AAGCCGGAGA ATTATCTCTG GGCAATATCT TTTTTAGCGT CAGTTCTATT ATTGAAAATC GCCAGGATAT CTCAGCAACT TTCCAAAATT CACTTTATAC TACACCTGCC ATAGCACCTG CTATGCCTTG GCAGACTGCA ACTACACCAC CTGCACCAAA AGAACTGCAA GTCAACAACC GCAGACTCAG TTGGCAACCA GGAGATAATC AACCCGTCCG TTCTTGGACA CTTTATCGTC AAACTGGCAG TAATTGGATA CTACAGCGAG TCTTGTCTGC TGGGACAACC TTCGCCACAG TCCAACCAGG AACCTATGCT GTCTGTGCAG TAGACCGATT AGCAAATGAG AGCCAGGGTG TAATCATTAA CGTTAGTTGA
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Protein sequence | MVSTTTRFSD IPNHWARPFI EALAARRILN GYPDGTFRPN NSVTRAEFAA IVAAVFNISV KRPYINFTDV PTSNWAANAI KKAYETGFLS GFPDKTFRPG NQISRGDILV SLVNGLEIAT KIKPDLLEKL PEIYQDAGNI PAYGRNQIAI ATSAGLVSSF PNIKSLNFTT AATRGDVAAI IYQALVYLGQ AEKIASVYLV IPPKPTLPTV RVSHNREFRG AWITTVWNSD WPSKAGLSVA QQQAELVAIL TRLQELNFNA VILQVRPEGD ALYASELEPW SAWLTGTPGK APEPFYDPLQ FAIAEAHKRN LEVHAWFNPY RAKTSTKSAP NVRPHISVTN PEVVYQWGNQ LWMDPGIKIV QDRAYNVIID VVRRYDIDAV HLDDYFYPYP IQGQAFPDDK TYAAYKSVGG QLNLNDWRRQ NVDQMVLRLS QGIKATKSYV KFGISPFGIY RPGQPPGITG LDAYSVLYAD AKKWLEQGWV DYLAPQLYWR TDQTSQSYPV LLKWWTEINS KRRHIYAGNN IGQLDGKAWK NEEIEKQVKI SRNQAGELSL GNIFFSVSSI IENRQDISAT FQNSLYTTPA IAPAMPWQTA TTPPAPKELQ VNNRRLSWQP GDNQPVRSWT LYRQTGSNWI LQRVLSAGTT FATVQPGTYA VCAVDRLANE SQGVIINVS
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