Gene Ava_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0183 
Symbol 
ID3683142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp238427 
End bp239629 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content45% 
IMG OID637715511 
Productpeptidase M23B 
Protein accessionYP_320704 
Protein GI75906408 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.956572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0114349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGC CAATTGTCCA ACAAATAAGA TTTTGGAAAT TATGTATTGT ATTGTGCTGT 
GTTTTGTGCA TATGTTTGGT GTCAATACCA GTATTTGCTA ATAATTCCGC TTCCATTGAT
ACCCTAAAAC AGCAGCAGCA ACAAATTCAG CAAGAAAGGC AAAATGTTGT ACAAGAACGC
GATCGCCTCA CTAATCTACA ACAAGCAGCG CAAAATCGCC TGACTGGTAT TGCTAACAAT
TTGCAAACCA CCAACAGTCA AATTAAAGAT AGTGAATTGC GATTACAACA GGCTAGCCAA
CGCCTCCAAC AGCTAGAGGC CAAATTAGCT GTGACGGAAC GTGCTTATGA AGAACGTCAA
GTTGCCACAG TAGCACGATT GCGATATCTC CAGCGATCGC CTCTCAATCA AGGATGGGCT
GTTTTATTGC AAAGCAGAGA TATCGGTGAT TTTTTCAGTC GTCGTCATCA GTTGAAGTTA
GTTTATCAGG CAGACCAGCA AATTTTGGCG AAACTCAGCA CTCAAGCCAA CTTGATTAAT
CAGCAGAAAA CTAAAGTAGA GGAGCAAAAA AACGAAGTTG CTTTGATTCG GGAACAACTA
TTGACGCAAA AATCTGATTA TCAAGCTCAA GCTCAATCTC AGTCAGAATT AATACAACGC
TTAAGTAGCG ATCGCCTGGC CTTAGAAGCC GCACAAAATC AACTAGAGAG AGATTCTAAA
AACCTGGAAG GGTTAATTCA GCAAAAGGTA GCAGAAGCCA AAGCCAGAGA AGAAGCACAA
GCCAAAACCA ATAGCCGGAC AAACATCATC ATCAAAGGAA CAGGGCTTTT TGCCTTTCCT
AGCAGTGCGC CTACAAGTAG TCCCTTCGGT TGGCGCGTAC ACCCCATTCT CGGCTATCGC
AGGTTTCACT CTGGGTTGGA TTTTGCCGCT AGTTATGGCA GTACAATCAG GGCAGCCGAT
TCGGGAACAG TAATTTTTGC TGGCTGGTAT GGCGGTTATG GTAGGGCTGT AATTATTAAT
CATGGTGGTG GGATCACGAC ACTGTACGGA CACGCCAGTG AATTATATGT TGCCGAGGGG
CAACCAGTAC AACGAGGGCA GGCGATCGCG GCTGTTGGTT CCACAGGCTT ATCTACCGGG
CCACATCTGC ATTTTGAAGT TCGTCGCAAT GGCACACCAG TCAACCCAGG AGATTATCTT
TAG
 
Protein sequence
MKAPIVQQIR FWKLCIVLCC VLCICLVSIP VFANNSASID TLKQQQQQIQ QERQNVVQER 
DRLTNLQQAA QNRLTGIANN LQTTNSQIKD SELRLQQASQ RLQQLEAKLA VTERAYEERQ
VATVARLRYL QRSPLNQGWA VLLQSRDIGD FFSRRHQLKL VYQADQQILA KLSTQANLIN
QQKTKVEEQK NEVALIREQL LTQKSDYQAQ AQSQSELIQR LSSDRLALEA AQNQLERDSK
NLEGLIQQKV AEAKAREEAQ AKTNSRTNII IKGTGLFAFP SSAPTSSPFG WRVHPILGYR
RFHSGLDFAA SYGSTIRAAD SGTVIFAGWY GGYGRAVIIN HGGGITTLYG HASELYVAEG
QPVQRGQAIA AVGSTGLSTG PHLHFEVRRN GTPVNPGDYL