Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0179 |
Symbol | |
ID | 3683137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 232862 |
End bp | 233836 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637715506 |
Product | phosphonate-binding periplasmic protein |
Protein accession | YP_320700 |
Protein GI | 75906404 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000309893 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0582753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTAG GCCAAAAAGG CTTGTTAGGT GCTGGCGCGG CATTGATGGC GCTGATGGGT GTGGCAGTTA CTACCGTTAG TGGTATCCAA GCGACAACTG CTAATTCTAT TTATAATCAA CAAGCGCCGC GCTTACTTGC CCAAAAACTG AAGACTTTAA CAGTAATTTT TCCCAGTCGT TCTGATTCGA CAGATTTGCA ATCTAAGGCA GATGCTGTAG CAGCTTTTTT ATCAAAGGAT TTGGGTATTC CTGTCAAAGC ACAGATAGGT GATGATACTG CGGCAGTGGA AGCTTTAAGA GCGAACCGGG CTGATGTGGC TTTTTTGAGC AGTCGTCCAG CGTTGAAAGC TGAACAATTA GCAAATGCTC GTTTGTATCT AGCAGAAGTA CGTGATACCT ATTCTGGCAG ATTCACTTAT AATTCAATCT TTGTCGTCCG CAACAGTAGC CCATTGAAAT CCAGAAATAA TGCCAAAGCC ACACTAGAAC AGCTACGTGG CAAAAAAATG GCATTTACAT CTCCCACCTC AGGTTCAGGA TTTATTTTCC CAGTTAGTGA ATTAGTTAAA CAGGGGTTTG TCCCTGACCG CGATCGCCTT GATGGTTTCT TTGGTCAAAT TGCCTATGGT GGTAACTACA GCAAAGCATT ACAAGCCGTA GTGCGCGGTC AAGCGGATGT GGCTGTTGTC TCAGAATACG CCATGTTTCC ACCGTACATT ACAGCAGAAG AAAAAAATCA GTTGCGAGTA CTGTATAAAA TTTCTGGTGT ACCCGCTCAC GGTATAGCCA TTGACGATGA CGTTGCTGCA CCCGATAGAG AAAGAATTAT TAATTCTCTA CTTAAGTTAA ATCAGTCACA AAATAACTCA CTGCTACGTA ACTTGTACAA CTCCACCGAA TTAGTGAGAG TAGATCACAG TCGTCACTTA GCACCAGTTC GGGATGCTCT TAAACGCGTT GGCATCGAAC CATAA
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Protein sequence | MSVGQKGLLG AGAALMALMG VAVTTVSGIQ ATTANSIYNQ QAPRLLAQKL KTLTVIFPSR SDSTDLQSKA DAVAAFLSKD LGIPVKAQIG DDTAAVEALR ANRADVAFLS SRPALKAEQL ANARLYLAEV RDTYSGRFTY NSIFVVRNSS PLKSRNNAKA TLEQLRGKKM AFTSPTSGSG FIFPVSELVK QGFVPDRDRL DGFFGQIAYG GNYSKALQAV VRGQADVAVV SEYAMFPPYI TAEEKNQLRV LYKISGVPAH GIAIDDDVAA PDRERIINSL LKLNQSQNNS LLRNLYNSTE LVRVDHSRHL APVRDALKRV GIEP
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