Gene Ava_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0179 
Symbol 
ID3683137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp232862 
End bp233836 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content44% 
IMG OID637715506 
Productphosphonate-binding periplasmic protein 
Protein accessionYP_320700 
Protein GI75906404 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000309893 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0582753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTAG GCCAAAAAGG CTTGTTAGGT GCTGGCGCGG CATTGATGGC GCTGATGGGT 
GTGGCAGTTA CTACCGTTAG TGGTATCCAA GCGACAACTG CTAATTCTAT TTATAATCAA
CAAGCGCCGC GCTTACTTGC CCAAAAACTG AAGACTTTAA CAGTAATTTT TCCCAGTCGT
TCTGATTCGA CAGATTTGCA ATCTAAGGCA GATGCTGTAG CAGCTTTTTT ATCAAAGGAT
TTGGGTATTC CTGTCAAAGC ACAGATAGGT GATGATACTG CGGCAGTGGA AGCTTTAAGA
GCGAACCGGG CTGATGTGGC TTTTTTGAGC AGTCGTCCAG CGTTGAAAGC TGAACAATTA
GCAAATGCTC GTTTGTATCT AGCAGAAGTA CGTGATACCT ATTCTGGCAG ATTCACTTAT
AATTCAATCT TTGTCGTCCG CAACAGTAGC CCATTGAAAT CCAGAAATAA TGCCAAAGCC
ACACTAGAAC AGCTACGTGG CAAAAAAATG GCATTTACAT CTCCCACCTC AGGTTCAGGA
TTTATTTTCC CAGTTAGTGA ATTAGTTAAA CAGGGGTTTG TCCCTGACCG CGATCGCCTT
GATGGTTTCT TTGGTCAAAT TGCCTATGGT GGTAACTACA GCAAAGCATT ACAAGCCGTA
GTGCGCGGTC AAGCGGATGT GGCTGTTGTC TCAGAATACG CCATGTTTCC ACCGTACATT
ACAGCAGAAG AAAAAAATCA GTTGCGAGTA CTGTATAAAA TTTCTGGTGT ACCCGCTCAC
GGTATAGCCA TTGACGATGA CGTTGCTGCA CCCGATAGAG AAAGAATTAT TAATTCTCTA
CTTAAGTTAA ATCAGTCACA AAATAACTCA CTGCTACGTA ACTTGTACAA CTCCACCGAA
TTAGTGAGAG TAGATCACAG TCGTCACTTA GCACCAGTTC GGGATGCTCT TAAACGCGTT
GGCATCGAAC CATAA
 
Protein sequence
MSVGQKGLLG AGAALMALMG VAVTTVSGIQ ATTANSIYNQ QAPRLLAQKL KTLTVIFPSR 
SDSTDLQSKA DAVAAFLSKD LGIPVKAQIG DDTAAVEALR ANRADVAFLS SRPALKAEQL
ANARLYLAEV RDTYSGRFTY NSIFVVRNSS PLKSRNNAKA TLEQLRGKKM AFTSPTSGSG
FIFPVSELVK QGFVPDRDRL DGFFGQIAYG GNYSKALQAV VRGQADVAVV SEYAMFPPYI
TAEEKNQLRV LYKISGVPAH GIAIDDDVAA PDRERIINSL LKLNQSQNNS LLRNLYNSTE
LVRVDHSRHL APVRDALKRV GIEP