Gene Ava_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0164 
Symbol 
ID3683244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp218107 
End bp218664 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content43% 
IMG OID637715491 
Producthypothetical protein 
Protein accessionYP_320685 
Protein GI75906389 
COG category[R] General function prediction only 
COG ID[COG5512] Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTTA AATCCGTTAA TGATATTTTA GGTGTTCTAG AAAAGCAGGC GAAATGGCAA 
CAACAACCAT TTCAGCAAGT ATGCCAGTTT TGGGCAGAAG TTGTAGGCAG CGCCATTGCC
GCCCAAACTC AACCTTTATC ACTACAGCGT GATGTTTTAC GCGTAGCAAC TTCTAGTGCC
GCTTGGGCGC AAAATTTGAC ATTTAGTCGT CAAACGTTAC TTTTAAAGTT AAATCAAAAG
TTATCTACCC CTATTGTAGA TTTGCGTTTT TCTACTGCTG GTTGGCAACG CCATCCACAA
AAGGAAAAAC CCCACTCAAT AGGGTTACAT AGCCAACATC CCAGTTATTT GGGTGATGTC
AATGAAGACC AGGGTCAAGT AACAGCAGTT AATCAAGATG TGAATCAGGT TTTTGGTCAT
TGGGCCAAGA CAAGGCAGAG GCGATTGCAA AATTTACCCC TTTGTCCTCA ATGTCAATGC
CCTACACCAC CAGGCGAACT CCAGCGTTGG GGGGTTTGTG GGTTTTGTAG CGTTAAGCAG
TTGCCCAAAA ATATGTAA
 
Protein sequence
MSFKSVNDIL GVLEKQAKWQ QQPFQQVCQF WAEVVGSAIA AQTQPLSLQR DVLRVATSSA 
AWAQNLTFSR QTLLLKLNQK LSTPIVDLRF STAGWQRHPQ KEKPHSIGLH SQHPSYLGDV
NEDQGQVTAV NQDVNQVFGH WAKTRQRRLQ NLPLCPQCQC PTPPGELQRW GVCGFCSVKQ
LPKNM