Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0126 |
Symbol | |
ID | 3683343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 168414 |
End bp | 170153 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637715453 |
Product | single-stranded nucleic acid binding R3H |
Protein accession | YP_320647 |
Protein GI | 75906351 |
COG category | [S] Function unknown |
COG ID | [COG3854] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACTA CAGACGATCT CCAAAAGTTG TTAGACATTT TGCCCCAAGA CCTGCGACAA GTACTAGAGA ACCATCCCAA ACGAGATAGT TTAGTAGAAG TGGTCTTGGA TTTGGGTCGT CGCCCAGAGG CTAGATTTCC TAATCAAGCC GAGTACCTGA GCGAAACACC CGTTACTCAA GCACAGATAG ATGATTGCGT TCAGCGCGTA GGAAACTTTG GTGGAGATAA TCGGGCAGGA ATTGAGCAAA CTTTGCATCG GATCAGTGCT ATCCGCAACC GCAGTGGTAA GATAATTGGT CTGACCTGTC GTGTTGGTCG AGCTGTATTC GGTACGATAG GCATGATCCG CGATTTGGTG GAAACTGGTA AATCGATTCT CATGCTAGGA CGGCCTGGTG TAGGTAAAAC TACAGCTTTA CGAGAAATTG CCCGTGTTTT AGCAGATGAA TTGCATAAAC GTGTGGTTAT CATTGACACC TCCAACGAAA TTGCTGGGGA TGGCGATGTT GCTCACCCAG CCATTGGTCG TGCTAGGCGG ATGCAGGTAG CTCATCCAGA ACTGCAACAT CAGGTAATGA TTGAGGCAGT AGAAAATCAT ATGCCAGAAG TCATTGTCAT TGATGAAATT GGTACAGAAC TGGAAGCTTT AGCAGCCCGT ACCATTGCCG AAAGAGGTGT ACAGTTGGTA GGTACTGCCC ACGGAAACCA GATAGAAAAC CTGATCAAAA ACCCCACACT GTCTGACTTA GTTGGGGGTA TTCAAGCTGT GACACTGGGA GACGATGAAG CGAGACGCAG GGGTAGTCAA AAAACTGTTT TAGAACGGAA AGCCCCGCCT ACCTTTGAGA TTGCCGTGGA AATGTTAGAA CGGCAACGTT GGGTAGTACA CGAAAGTGTT GCGGATACGG TGGATACGCT TCTCCGAGGC CGTCAGCCTA GTCCACAAAC GAGAACAGTG GATGACCAAG GCAAAGTCGC CATCACACGA CAATTATCTG TTGTTAATGG TCGTGGCGGA CAGTTGGCAA CTCCTGAAGA ATCTTTTTCA CCAGCTAGAG CATCTAATGG TTGGCGTGCA TCAGGACAAA TGCTAGCCAT CCCATCATTA CCCCTAGAGC GAGAAAGAAT TTCTGGACAA AGTGAATTTG ACCGCTTGCT AGATGAATCG TTTAACTACC CAGAAGCTAT CGATTTCGGC AGTAGTGCTA GACAACCAGG CCCCAACGGT GAAGATTTGC CACTGCACAT TTACCCTTAT GGTGTGAGTA GACATCAGCT AGAACAGGTG ATTAGTGTTT TAACTTTGCC TGTGGTATTG ACAAAAGATA TAGATAATGC TGATGCAATT CTGGCATTGC GATCGCACGT CAAAAACCAC GCTAAATTAA GGCAGATGGC TAAAGCCCGT CATGTACCTA TCCATGTGAT TAAGTCGAGT ACCATTCCTC AAATTACCCG TGGACTGCGG CGCTTACTTA ACTTGGATGA TCCAGAAATA GCGGATGACC GAGAACTACA ATTGTTTCTG CACAACGGTA GCGACGACGA AATGGACGCT TTAGAAGAAG CAAGACTAGC CGTCGAGCAA ATCGTCATTC CCAAAGGACA ACCCGTGGAG TTATTACCCC GTTCTCCGCA AGTCCGCAAA ATGCAGCATG AGCTAGTAGA ACACTATCGG CTCAAGTCCC ATAGTTTTGG GGAAGAACCA AACCGTCGTT TACGGATTTA TCCAGCGTAA
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Protein sequence | MTTTDDLQKL LDILPQDLRQ VLENHPKRDS LVEVVLDLGR RPEARFPNQA EYLSETPVTQ AQIDDCVQRV GNFGGDNRAG IEQTLHRISA IRNRSGKIIG LTCRVGRAVF GTIGMIRDLV ETGKSILMLG RPGVGKTTAL REIARVLADE LHKRVVIIDT SNEIAGDGDV AHPAIGRARR MQVAHPELQH QVMIEAVENH MPEVIVIDEI GTELEALAAR TIAERGVQLV GTAHGNQIEN LIKNPTLSDL VGGIQAVTLG DDEARRRGSQ KTVLERKAPP TFEIAVEMLE RQRWVVHESV ADTVDTLLRG RQPSPQTRTV DDQGKVAITR QLSVVNGRGG QLATPEESFS PARASNGWRA SGQMLAIPSL PLERERISGQ SEFDRLLDES FNYPEAIDFG SSARQPGPNG EDLPLHIYPY GVSRHQLEQV ISVLTLPVVL TKDIDNADAI LALRSHVKNH AKLRQMAKAR HVPIHVIKSS TIPQITRGLR RLLNLDDPEI ADDRELQLFL HNGSDDEMDA LEEARLAVEQ IVIPKGQPVE LLPRSPQVRK MQHELVEHYR LKSHSFGEEP NRRLRIYPA
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