Gene Ava_0126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0126 
Symbol 
ID3683343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp168414 
End bp170153 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content47% 
IMG OID637715453 
Productsingle-stranded nucleic acid binding R3H 
Protein accessionYP_320647 
Protein GI75906351 
COG category[S] Function unknown 
COG ID[COG3854] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACTA CAGACGATCT CCAAAAGTTG TTAGACATTT TGCCCCAAGA CCTGCGACAA 
GTACTAGAGA ACCATCCCAA ACGAGATAGT TTAGTAGAAG TGGTCTTGGA TTTGGGTCGT
CGCCCAGAGG CTAGATTTCC TAATCAAGCC GAGTACCTGA GCGAAACACC CGTTACTCAA
GCACAGATAG ATGATTGCGT TCAGCGCGTA GGAAACTTTG GTGGAGATAA TCGGGCAGGA
ATTGAGCAAA CTTTGCATCG GATCAGTGCT ATCCGCAACC GCAGTGGTAA GATAATTGGT
CTGACCTGTC GTGTTGGTCG AGCTGTATTC GGTACGATAG GCATGATCCG CGATTTGGTG
GAAACTGGTA AATCGATTCT CATGCTAGGA CGGCCTGGTG TAGGTAAAAC TACAGCTTTA
CGAGAAATTG CCCGTGTTTT AGCAGATGAA TTGCATAAAC GTGTGGTTAT CATTGACACC
TCCAACGAAA TTGCTGGGGA TGGCGATGTT GCTCACCCAG CCATTGGTCG TGCTAGGCGG
ATGCAGGTAG CTCATCCAGA ACTGCAACAT CAGGTAATGA TTGAGGCAGT AGAAAATCAT
ATGCCAGAAG TCATTGTCAT TGATGAAATT GGTACAGAAC TGGAAGCTTT AGCAGCCCGT
ACCATTGCCG AAAGAGGTGT ACAGTTGGTA GGTACTGCCC ACGGAAACCA GATAGAAAAC
CTGATCAAAA ACCCCACACT GTCTGACTTA GTTGGGGGTA TTCAAGCTGT GACACTGGGA
GACGATGAAG CGAGACGCAG GGGTAGTCAA AAAACTGTTT TAGAACGGAA AGCCCCGCCT
ACCTTTGAGA TTGCCGTGGA AATGTTAGAA CGGCAACGTT GGGTAGTACA CGAAAGTGTT
GCGGATACGG TGGATACGCT TCTCCGAGGC CGTCAGCCTA GTCCACAAAC GAGAACAGTG
GATGACCAAG GCAAAGTCGC CATCACACGA CAATTATCTG TTGTTAATGG TCGTGGCGGA
CAGTTGGCAA CTCCTGAAGA ATCTTTTTCA CCAGCTAGAG CATCTAATGG TTGGCGTGCA
TCAGGACAAA TGCTAGCCAT CCCATCATTA CCCCTAGAGC GAGAAAGAAT TTCTGGACAA
AGTGAATTTG ACCGCTTGCT AGATGAATCG TTTAACTACC CAGAAGCTAT CGATTTCGGC
AGTAGTGCTA GACAACCAGG CCCCAACGGT GAAGATTTGC CACTGCACAT TTACCCTTAT
GGTGTGAGTA GACATCAGCT AGAACAGGTG ATTAGTGTTT TAACTTTGCC TGTGGTATTG
ACAAAAGATA TAGATAATGC TGATGCAATT CTGGCATTGC GATCGCACGT CAAAAACCAC
GCTAAATTAA GGCAGATGGC TAAAGCCCGT CATGTACCTA TCCATGTGAT TAAGTCGAGT
ACCATTCCTC AAATTACCCG TGGACTGCGG CGCTTACTTA ACTTGGATGA TCCAGAAATA
GCGGATGACC GAGAACTACA ATTGTTTCTG CACAACGGTA GCGACGACGA AATGGACGCT
TTAGAAGAAG CAAGACTAGC CGTCGAGCAA ATCGTCATTC CCAAAGGACA ACCCGTGGAG
TTATTACCCC GTTCTCCGCA AGTCCGCAAA ATGCAGCATG AGCTAGTAGA ACACTATCGG
CTCAAGTCCC ATAGTTTTGG GGAAGAACCA AACCGTCGTT TACGGATTTA TCCAGCGTAA
 
Protein sequence
MTTTDDLQKL LDILPQDLRQ VLENHPKRDS LVEVVLDLGR RPEARFPNQA EYLSETPVTQ 
AQIDDCVQRV GNFGGDNRAG IEQTLHRISA IRNRSGKIIG LTCRVGRAVF GTIGMIRDLV
ETGKSILMLG RPGVGKTTAL REIARVLADE LHKRVVIIDT SNEIAGDGDV AHPAIGRARR
MQVAHPELQH QVMIEAVENH MPEVIVIDEI GTELEALAAR TIAERGVQLV GTAHGNQIEN
LIKNPTLSDL VGGIQAVTLG DDEARRRGSQ KTVLERKAPP TFEIAVEMLE RQRWVVHESV
ADTVDTLLRG RQPSPQTRTV DDQGKVAITR QLSVVNGRGG QLATPEESFS PARASNGWRA
SGQMLAIPSL PLERERISGQ SEFDRLLDES FNYPEAIDFG SSARQPGPNG EDLPLHIYPY
GVSRHQLEQV ISVLTLPVVL TKDIDNADAI LALRSHVKNH AKLRQMAKAR HVPIHVIKSS
TIPQITRGLR RLLNLDDPEI ADDRELQLFL HNGSDDEMDA LEEARLAVEQ IVIPKGQPVE
LLPRSPQVRK MQHELVEHYR LKSHSFGEEP NRRLRIYPA