Gene Ava_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0086 
Symbol 
ID3683439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp115396 
End bp115920 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content39% 
IMG OID637715413 
Producthypothetical protein 
Protein accessionYP_320607 
Protein GI75906311 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0304385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0585823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGTTGCG TTTTCATTAC CCGCGAGGAC AGCAACATCC GTGATTTACA AGATTTACAG 
CGTAAAACAG TAGCTTTAGG ACAATTAGGG TCAGCGACAG GATATTATTT ACCTCTTTAT
AATCTATATG GTCTAACGCT GGCGGAAATT TTGTCTGCAC CTACACCAAG AACTATTATG
GAATGGGTAG CTGAAGGAAA AGTAGCAGCT GGTGCTGTTT CTATGGCAGA ATTTAATCTT
TATAGATCAA AATTCCCAGG AACTAAATTT CGCGTCCTCT ACACAGATCC ACACTATGTT
CCACCTGGTG TTGTGTTGAT GGAATCAACG ATAGAAAGCA AACGCCAAGA ATTCATTCGC
AAAGTTATGA GTGAGTTTCC TTCAACTTCG GCTCAAGAGA TTGGCTATAT ACCCAATGCA
CAAATCCCAA ATTACAAATA CATGATTAGT GTGGTGGAAC GAGTACAACC AATTGCTTCT
CAATTGCAAA GTAAGCCAGT GCAGTTATTT AATAAAACAA TTTAA
 
Protein sequence
MRCVFITRED SNIRDLQDLQ RKTVALGQLG SATGYYLPLY NLYGLTLAEI LSAPTPRTIM 
EWVAEGKVAA GAVSMAEFNL YRSKFPGTKF RVLYTDPHYV PPGVVLMEST IESKRQEFIR
KVMSEFPSTS AQEIGYIPNA QIPNYKYMIS VVERVQPIAS QLQSKPVQLF NKTI