Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0068 |
Symbol | |
ID | 3683480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 91211 |
End bp | 93052 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637715395 |
Product | AAA ATPase, central region |
Protein accession | YP_320589 |
Protein GI | 75906293 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.263545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00768241 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGATT TATTCAAGGG ATTTGAACAG TTAATTGAAT TAGTCAAAAC TTTAGAGGAA AAAGCCGAGA AAGGAGAAAT TAAAACCGAT TTCCAGATTA ACTCTCGTTC TATGAGTAGT ATTCCTCGGA CTGGCAATAT CCCGCGTCCT AATAATATGG CTAATGATAT TGGTACAAGC CGTATTCGCA CCCAACCCTC TCCTAATTCT GATTCAGGGA ATGGAGACAC TTCTGATGTT GTTGTTCCAC CAGATGCGCC TTCCGGTAAT TCCTTGAAAG ATGTTGGCGG ACTGGGTGAG GTTGTTAAAG AACTTAAAGA ATTAATCGCT ATTCCCTTAA AACGCCCTGA TTTACTGGCA AAGTTAGGAT TGGAACCTAC GCGGGGTGTA CTTTTAGTTG GGCCTCCTGG TACTGGTAAA ACTCTGACTG CTCGTGGTTT AGCTGAGGAA CTTGGTGTTA ACTATATTGC GCTGGTGGGG CCGGAAGTTA TCAGTAAATA TTATGGTGAA GCCGAGCAAA GACTGCGGGG TATTTTTGAG AAGGCTGCTA AGAATGCTCC TTGTATTATT TTCATTGATG AAATCGATAG TCTAGCTCCA GACCGGAGTG CAGTAGAAGG GGAAGTAGAA AAACGTCTTG TAGCCCAACT TTTAAGCCTG ATGGATGGTT TTTCCCACAG TCAAGGTGTG ATTGTACTGG CTGCCACTAA CCGTCCTGAC CATCTTGACC CAGCTTTGCG CCGTCCGGGG CGATTTGATC GGGAAGTCCA GTTTCGTGTC CCAGATGTGA AAGGACGCAG AGATATTCTG CAAATTCTCA CCCGTGCCAT GCCTTTGGAA GACACGGTTG ACCTGGATGC GATCGCCGAA CGCTCGGTGG GGTTTGTGGG ATCTGACTTA AAAGCCCTGT GCCAAAAGGC GGCGTATACT GCTCTGCGCC GTCAAATGCC TTCGGTTGAA AGTGCAGTTC CAGAGAATAT GACGGTTAGC CAAGTTGACT TTTTGCAAGC CCTCAAAGAA ATCAAACCAG CTGTACTGCG GAGTGTGGAA GTCGAAGTTC CCCATATCGC CTGGGACGAT ATTGGTGGTT TGGATACGAT TAAGCAAACC CTACGGGAAT CAGTAGAAGG AGCGCTGTTA TATCCAGAAC TGTATCTGCA AACCAAAGCA CTAGCACCAA AAGGCATCTT ATTATGGGGG CCACCAGGGA CAGGAAAAAC TTTATTAGCT AAAGCTGTTG CTTCCCAAGC CAGAGCTAAT TTTATTGGTG TCAATGGCCC AGAATTACTC AGCCGTTGGG TGGGTGCAAG TGAACAAGCA GTACGGGAGT TATTTGCCAA AGCGCGTCAA GCAGAGCCTT GTGTCGTATT TATTGATGAA ATTGATACCT TAGCTCCAGC GCGGGGTAGT TTCAGTGGTG ATTCGGGAGT GAGCGATCGC GTAGTTGGAC AATTGCTCAC AGAGTTGGAT GGCATAGAAG TAGGGAGTAC TATTTTAGTA ATTGGGGCAA CAAATCGACC CGATGCCCTT GACCCGGCTT TGTTACGGGC TGGACGCTTA GATTTACAAA TGAAGGTAGA TTTACCAGAT TTAGCTAGTC GTCTGGCGAT TCTCCAAGTC CATAGTCAAG GACGACCCTT GGAAGGTGTG GATTTCAACT ATTGGGCAGA GATGACTAAA AATTGGAATG GTGCAGATTT AACTTTACTG TGCAATCAAG CGGCGGTAGA AGCAATTCGT CGTTTTCGCT CCCAAGGATT GACAGACCCT TCTGAAATCA AGATTACTAC TGATGATTTC AACTATGCTT ATAAAGTTCT CACAGAACAG CGTCCAGATT AA
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Protein sequence | MSDLFKGFEQ LIELVKTLEE KAEKGEIKTD FQINSRSMSS IPRTGNIPRP NNMANDIGTS RIRTQPSPNS DSGNGDTSDV VVPPDAPSGN SLKDVGGLGE VVKELKELIA IPLKRPDLLA KLGLEPTRGV LLVGPPGTGK TLTARGLAEE LGVNYIALVG PEVISKYYGE AEQRLRGIFE KAAKNAPCII FIDEIDSLAP DRSAVEGEVE KRLVAQLLSL MDGFSHSQGV IVLAATNRPD HLDPALRRPG RFDREVQFRV PDVKGRRDIL QILTRAMPLE DTVDLDAIAE RSVGFVGSDL KALCQKAAYT ALRRQMPSVE SAVPENMTVS QVDFLQALKE IKPAVLRSVE VEVPHIAWDD IGGLDTIKQT LRESVEGALL YPELYLQTKA LAPKGILLWG PPGTGKTLLA KAVASQARAN FIGVNGPELL SRWVGASEQA VRELFAKARQ AEPCVVFIDE IDTLAPARGS FSGDSGVSDR VVGQLLTELD GIEVGSTILV IGATNRPDAL DPALLRAGRL DLQMKVDLPD LASRLAILQV HSQGRPLEGV DFNYWAEMTK NWNGADLTLL CNQAAVEAIR RFRSQGLTDP SEIKITTDDF NYAYKVLTEQ RPD
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