Gene Ava_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0068 
Symbol 
ID3683480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp91211 
End bp93052 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content46% 
IMG OID637715395 
ProductAAA ATPase, central region 
Protein accessionYP_320589 
Protein GI75906293 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.263545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00768241 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGATT TATTCAAGGG ATTTGAACAG TTAATTGAAT TAGTCAAAAC TTTAGAGGAA 
AAAGCCGAGA AAGGAGAAAT TAAAACCGAT TTCCAGATTA ACTCTCGTTC TATGAGTAGT
ATTCCTCGGA CTGGCAATAT CCCGCGTCCT AATAATATGG CTAATGATAT TGGTACAAGC
CGTATTCGCA CCCAACCCTC TCCTAATTCT GATTCAGGGA ATGGAGACAC TTCTGATGTT
GTTGTTCCAC CAGATGCGCC TTCCGGTAAT TCCTTGAAAG ATGTTGGCGG ACTGGGTGAG
GTTGTTAAAG AACTTAAAGA ATTAATCGCT ATTCCCTTAA AACGCCCTGA TTTACTGGCA
AAGTTAGGAT TGGAACCTAC GCGGGGTGTA CTTTTAGTTG GGCCTCCTGG TACTGGTAAA
ACTCTGACTG CTCGTGGTTT AGCTGAGGAA CTTGGTGTTA ACTATATTGC GCTGGTGGGG
CCGGAAGTTA TCAGTAAATA TTATGGTGAA GCCGAGCAAA GACTGCGGGG TATTTTTGAG
AAGGCTGCTA AGAATGCTCC TTGTATTATT TTCATTGATG AAATCGATAG TCTAGCTCCA
GACCGGAGTG CAGTAGAAGG GGAAGTAGAA AAACGTCTTG TAGCCCAACT TTTAAGCCTG
ATGGATGGTT TTTCCCACAG TCAAGGTGTG ATTGTACTGG CTGCCACTAA CCGTCCTGAC
CATCTTGACC CAGCTTTGCG CCGTCCGGGG CGATTTGATC GGGAAGTCCA GTTTCGTGTC
CCAGATGTGA AAGGACGCAG AGATATTCTG CAAATTCTCA CCCGTGCCAT GCCTTTGGAA
GACACGGTTG ACCTGGATGC GATCGCCGAA CGCTCGGTGG GGTTTGTGGG ATCTGACTTA
AAAGCCCTGT GCCAAAAGGC GGCGTATACT GCTCTGCGCC GTCAAATGCC TTCGGTTGAA
AGTGCAGTTC CAGAGAATAT GACGGTTAGC CAAGTTGACT TTTTGCAAGC CCTCAAAGAA
ATCAAACCAG CTGTACTGCG GAGTGTGGAA GTCGAAGTTC CCCATATCGC CTGGGACGAT
ATTGGTGGTT TGGATACGAT TAAGCAAACC CTACGGGAAT CAGTAGAAGG AGCGCTGTTA
TATCCAGAAC TGTATCTGCA AACCAAAGCA CTAGCACCAA AAGGCATCTT ATTATGGGGG
CCACCAGGGA CAGGAAAAAC TTTATTAGCT AAAGCTGTTG CTTCCCAAGC CAGAGCTAAT
TTTATTGGTG TCAATGGCCC AGAATTACTC AGCCGTTGGG TGGGTGCAAG TGAACAAGCA
GTACGGGAGT TATTTGCCAA AGCGCGTCAA GCAGAGCCTT GTGTCGTATT TATTGATGAA
ATTGATACCT TAGCTCCAGC GCGGGGTAGT TTCAGTGGTG ATTCGGGAGT GAGCGATCGC
GTAGTTGGAC AATTGCTCAC AGAGTTGGAT GGCATAGAAG TAGGGAGTAC TATTTTAGTA
ATTGGGGCAA CAAATCGACC CGATGCCCTT GACCCGGCTT TGTTACGGGC TGGACGCTTA
GATTTACAAA TGAAGGTAGA TTTACCAGAT TTAGCTAGTC GTCTGGCGAT TCTCCAAGTC
CATAGTCAAG GACGACCCTT GGAAGGTGTG GATTTCAACT ATTGGGCAGA GATGACTAAA
AATTGGAATG GTGCAGATTT AACTTTACTG TGCAATCAAG CGGCGGTAGA AGCAATTCGT
CGTTTTCGCT CCCAAGGATT GACAGACCCT TCTGAAATCA AGATTACTAC TGATGATTTC
AACTATGCTT ATAAAGTTCT CACAGAACAG CGTCCAGATT AA
 
Protein sequence
MSDLFKGFEQ LIELVKTLEE KAEKGEIKTD FQINSRSMSS IPRTGNIPRP NNMANDIGTS 
RIRTQPSPNS DSGNGDTSDV VVPPDAPSGN SLKDVGGLGE VVKELKELIA IPLKRPDLLA
KLGLEPTRGV LLVGPPGTGK TLTARGLAEE LGVNYIALVG PEVISKYYGE AEQRLRGIFE
KAAKNAPCII FIDEIDSLAP DRSAVEGEVE KRLVAQLLSL MDGFSHSQGV IVLAATNRPD
HLDPALRRPG RFDREVQFRV PDVKGRRDIL QILTRAMPLE DTVDLDAIAE RSVGFVGSDL
KALCQKAAYT ALRRQMPSVE SAVPENMTVS QVDFLQALKE IKPAVLRSVE VEVPHIAWDD
IGGLDTIKQT LRESVEGALL YPELYLQTKA LAPKGILLWG PPGTGKTLLA KAVASQARAN
FIGVNGPELL SRWVGASEQA VRELFAKARQ AEPCVVFIDE IDTLAPARGS FSGDSGVSDR
VVGQLLTELD GIEVGSTILV IGATNRPDAL DPALLRAGRL DLQMKVDLPD LASRLAILQV
HSQGRPLEGV DFNYWAEMTK NWNGADLTLL CNQAAVEAIR RFRSQGLTDP SEIKITTDDF
NYAYKVLTEQ RPD