| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0053 |
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| Symbol | |
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| ID | 3683562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 61940 |
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| End bp | 64375 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637715380 |
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| Product | filamentous haemagglutinin-like protein |
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| Protein accession | YP_320574 |
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| Protein GI | 75906278 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3210] Large exoproteins involved in heme utilization or adhesion |
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| TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.710253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAAAT CTAAGTTTTT AATCTGGAAT ATCAGTATTT TATTGTGTTT ATTAAATTTC
ACCGCCGCAA AAGCAGAAAT CATTCCCGAT ACTACACTTC CTAATAACTC TACTGTTAGA
CCAGTGAGGA ATATCCGAGT AATTGAGGGA GGTACTCAAA GAGGAGAAAA TTTATTTCAT
AGCTTTAGGG AATTTTCTTT TTCTGCCTTA ACTACTAATG TTACAGGAAA TGTTGCTATT
TTTAATCACA ATTTGGCAGT ACGAAATATT ATTACTAGAA TTACAGGTGG CTCACCTAGT
TATATTGATG GTTTGATTAC AGCTACCTCA GGTAGTAGAG CTAATTTGTT TTTGATTAAT
CCTCAGGGCA TAATTTTTGG GGCAAATGCT AGTTTAAATA TTGGCGGTTC TTTTGTGGCG
ACTACTGCAA ATAGTATCAA GTTTGCTGAT GGGATAGAAT TTAACGCAAC TACTAATAAT
AATACCTCTT TATTAACAGT AAATGTTCCT GTAGGGTTGC AATTTGGTGA TAATCCGGGA
AATATTGAAC AGCCAATGGT TGCTAATTTA CCTTTGGAAT TGCAAGTAAG AGATGGCAGA
ACTTTAGGAT TAATCGGTGG GAATTTATTA TTAGAAAGTA GTCTTTTGGA AGCGCCAGGG
GGCAGGGTTG AGCTAGGTAG TGTTAGTAGA AATGGCTTTG TCAGCCTCAG CCAAATTGAT
GATGCTTACG TTGCTGGATA TTCAGGTGTA CAAGATTTTG GAGATATCAA TCTTGCGGCT
GGAACTTTAG TTAATAGTGG TAGTGTACCC ATGCAAGATA GTGGTGGTGC AATTCAAATT
CAAGGAAGAA ATGTCACTAT TGATGATTCA CTAGTTTTTA CGGTTAACTC TGGTTCGCAA
ACAGGAAATA ACCTCGTTGT TAATGCTTCT GAATCTTTAA AAGTAGGTGG CACTTCTAAT
ATCTTGACTA TTGCTCAGGC TGAAGGTAAG GCGGGAGATA TTTGGATTAC AGCTAAAGAT
TCAGTAGAAT TAAGGGAAGA ATCCTTCATT GGTTCACAAG TCTGTTCTTT AGGTGGAAAT
TGTGCCAATG TGACAGGTAA TGGTGGCAAT TTGACCATTG AAACCGGGCG ACTTTTGCTA
ACAGATGGTG CGGGAATAGA AGCTTCTACG TTTGGTGCAG GAAACACGGG AAATATTTTA
GTTAGAGCTA CAGATTCTAT AGATTTAAGG GGAGAAAGTC CCGATGGTGA TATTCCCAGT
GGAATTTTCG CGCAAGTTTC CCCCGATGCT CCCGGAAATG CCGGTAATAC TGGCACAATT
ACCCTACAAA CTAGACGGTT GAATATTCAA GGTGGCGCAC AAATATCTAA TGTTTCTAGG
TATGGAAGTC AGGGGGGTGA TGTCTTGATT AATGCCTCAG CAGGTATTCA AGTGAGTGGT
GCTTCCCAAT TTACTACAGC CTCATCTTTA GATATTTTTC GTAGTGGGAT TTTTGCTGCA
ACTCAAGCAG GAACTACCAC CAATGACAGC ACATTAAATA TCAATACTGG ATTACTGACT
GTAGAAAACG GAGCCAGGCT AACAGCAAAT AACTTAAATA TTGTAGGCGA TCGCCTAATT
GTCCAAAATG GGGCAGAAGT TACCGTGGCT GGAGAGTCGG GGAATTTATC TATCAAGGCG
CGATCGCTTA AACTAGATAA CCAAAGTCAA TTAATTGCTC AAACTACCTC CGGTAATGGT
GGCAATATCA CTCTCAATCT CAGCGCTATA TTGCGACTAC GCCTGAATAG TCAAATTTCT
ACATTTGCTG ATGGTAATGG TGGCAACATC GAAATTAATA GTCCTTTCAT TGTGGCAACT
CCCAATGAAA ATAACGACAT CGTTGCCAAT GTGTTTGGGG GTGCAGGGGG TCGGGTGACA
ATCAGTACTC AGAAATTTCT TGGTTTAGTT GTGCGTAATC GAGGCGAACT TGAGCAAATT
TTAGGGACTA CTGACCCAAA TCAGCTTGAC TCAGGATTTC TACTAACCAA TGACATTGTT
ACTTTCTCAC AGACCAGCCC ATCTTTAATA AGTACGGCCA CAATTAACAG GCCGGATGTA
GACTCGCGTC AGAGATTTGC TGCGTTCCCC ACAAATCCCA TCAATACATC CAGGCTAACC
CAGGTTTGTA GTTCAGATAG TAGGAAAAAA CCACGACTGA AAGACAGTTT TCAAGGAGAA
CGGGAAACCA AAAATTCCCC CAGTCCTCAC CATTTGTTAA CAATCAGTAA TTTTACCCCC
ATTGATGTTG TGGATAACCC TGATTCCCCT AAAATTGTGG AAGCACAGGG ATGGGTGATC
GATACTGATG GCAATATTAC CTTAGTTGCT CCAGTTCCTA CTGTTAATCA TCACTATCCC
TGGTTTTCGT CCACCATCTG CCATATTCAT GAATAA
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| Protein sequence | MVKSKFLIWN ISILLCLLNF TAAKAEIIPD TTLPNNSTVR PVRNIRVIEG GTQRGENLFH
SFREFSFSAL TTNVTGNVAI FNHNLAVRNI ITRITGGSPS YIDGLITATS GSRANLFLIN
PQGIIFGANA SLNIGGSFVA TTANSIKFAD GIEFNATTNN NTSLLTVNVP VGLQFGDNPG
NIEQPMVANL PLELQVRDGR TLGLIGGNLL LESSLLEAPG GRVELGSVSR NGFVSLSQID
DAYVAGYSGV QDFGDINLAA GTLVNSGSVP MQDSGGAIQI QGRNVTIDDS LVFTVNSGSQ
TGNNLVVNAS ESLKVGGTSN ILTIAQAEGK AGDIWITAKD SVELREESFI GSQVCSLGGN
CANVTGNGGN LTIETGRLLL TDGAGIEAST FGAGNTGNIL VRATDSIDLR GESPDGDIPS
GIFAQVSPDA PGNAGNTGTI TLQTRRLNIQ GGAQISNVSR YGSQGGDVLI NASAGIQVSG
ASQFTTASSL DIFRSGIFAA TQAGTTTNDS TLNINTGLLT VENGARLTAN NLNIVGDRLI
VQNGAEVTVA GESGNLSIKA RSLKLDNQSQ LIAQTTSGNG GNITLNLSAI LRLRLNSQIS
TFADGNGGNI EINSPFIVAT PNENNDIVAN VFGGAGGRVT ISTQKFLGLV VRNRGELEQI
LGTTDPNQLD SGFLLTNDIV TFSQTSPSLI STATINRPDV DSRQRFAAFP TNPINTSRLT
QVCSSDSRKK PRLKDSFQGE RETKNSPSPH HLLTISNFTP IDVVDNPDSP KIVEAQGWVI
DTDGNITLVA PVPTVNHHYP WFSSTICHIH E
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