| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0030 |
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| Symbol | |
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| ID | 3678875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 28254 |
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| End bp | 30899 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637715357 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_320551 |
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| Protein GI | 75906255 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACTC TCGTCATTGT CGAATCTCCA ACCAAAGCTC GTACCATTCG TAACTACCTG
CCAAAAGACT ATCGGGTAGA AGCGTCGATG GGTCATGTAC GTGACCTACC CCAGTCAGCT
AGTGAAATTC CCGCCACTGT TAAAGGGGAA GCATGGGCGC AGCTTGGGGT AAATGTGGAC
GCGGACTTTG AACCAGTGTA TGTTGTCCCC AAAGACAAAA AGAAAGTTGT CACCCAGCTC
AAAGAAGCGC TAAAAGATGC TGATGAACTG ATTCTAGCTA CTGACGAAGA CCGAGAAGGT
GAAAGCATCA GTTGGCATTT ATACCAGTTG CTGAAGCCAA AAGTGCCGAC AAAGCGGATG
GTGTTTCATG AGATTACCCA AGAAGCCATC AAAAAAGCTT TAAAGGACTG CCGCAACATC
GATGAGCAGC TAGTCCGCGC CCAGGAAACA CGACGGATTT TAGATCGTTT GGTGGGCTAT
ACCCTCTCCC CTCTGCTGTG GAAAAAAATT GCTTGGGGAT TATCTGCGGG ACGGGTACAG
TCTGTGGCTG TGCGACTGCT AGTCAACAAA GAACGCCAAC GCCGGGCTTT CCGTGAAGGT
ACATATTGGG ACTTAAAGGC GTATTTGGAG CAAAGCAAAA GCCCATTTAC CGCCCAGTTA
ACCACCTTAG CAGGCACGAA AGTGGCGACT GGGAGCGATT TTGATGCGTC TACAGGCAGA
ATCACCGCCG GGCGCAATGT GGTGCTGCTG ACTGAAACAG AAGCAGTTGC TCTCCAAGAA
CGACTGACTG GTAAAACCTG GAATGTCTCA GAGGTAGAAG AACGCCCAGT GACGCGTAAA
CCCGCGCCAC CCTTTACCAC TTCTACATTA CAGCAGGAAT CTAACCGTAA ACTGCGCCTG
TCAGCACGGG ACACGATGCG GATTGCCCAG AATTTATACG AGCAAGGGTA TATTACCTAT
ATGCGTACAG ATTCGGTGCA TTTGTCAGAA CAGGCGATCG CAGCTGCTCG CAATTGTGTA
GAACAACTAT ACGGCAAACA ATATCTCAGC CCCCAGCCTC GCCAATACAC CACCAAATCC
AAAGGCGCAC AAGAAGCCCA CGAAGCTATT CGTCCGGCTG GTAGTACCTT CCGCACGCCC
CAAGAAACCG GCTTAGGTGG TCGAGAACTT GCCCTCTATG ATTTGATTTG GAAGCGTACC
GTCGCCAGTC AAATGGCTGA CTCCCGCCAA ACCCAAATTA CCGTGCAGTT GCAAGTAGAA
GACGCTGGTT TCCGTGCTTC CGGTAAGCGG ATTGACTTCC CTGGATATTT ACGCGCCTAT
GTTGAAGGTT CTGATGACCC AGAAGCCGCC TTGGAAGACC AAGAGGTAAT CTTACCCAGT
CTAAAAGTCG GGGATCATCC AGACTGCAAA AATATCGAAG CAGTTGGTCA CGAAACCCAA
CCTCCAGCCA GATACACTGA AGCCACCCTA GTCAAAACCC TAGAAAGTGA AGGCATTGGT
CGCCCTAGTA CCTACGCCAG CATCATCGGC ACAATTATCG ATAAGGGTTA CTCCCAATTG
GTGAATAACG CCCTCATCCC CACCTTTACC GCCTTCGCCG TCACCGATTT GTTGGAAAAA
CATTTCCCTG ATATCGTTGA CCCCAGTTTT ACCTCCAAAA TGGAGCAAAC CTTGGATGAT
ATTGCTGAAG GTGAAGCTCA GTGGCTACCC TACTTAAAGA AATTTTATTT AGGGGATCAA
GGTTTGGAAA CTCTGGTGAG AGAACGGGAA AGCCAAATTG ATGCAGGTAA AGCCAGAACC
GTAGAACTAG AAAACTTAGA TGCTAAAGTC CGTATTGGTA AATATGGGCC TTATATCGAA
GTGGAAAACG GTGACGGTGT AGTTACCGCC TCAATTCCCA AAGATTTAAC ACCCGCCGAC
CTCGACCCCA AACAGGTAGA AATCATCCTG CGGCAAAAAA CTGTCGGCCC AGACCAACTA
GGCCGCCATC CGGAAACCGG CGAACCAATT TACGTGAAAA TCGGCGCTTA CGGGCCTTAT
GTCCAATTGG GTGATAAGTC TGATGAGAAT CCCAAACCCA AACAAGCTTC TCTACCCAAA
GGGGTTACCC CAGAAAACAT CTCCTTAGAG ACGGCTATTG GCTTGTTATC ACTACCCCGA
ACCTTGGGAA CCCATCCTGC TACTGGAGGG AAAATCCAAG CCAGTCTAGG ACGTTTTGGC
CCTTACGTCG TCCACGACCA AGGCAAAGAA GGTAAAGACT ACCGTTCTCT CAAAGCGAGT
GATGATGTTT TAACAATTTC TTTAGAAAGA GCGCTGGAGT TGATATCGGA ACCGAAAAAG
ACCCGTGGTT CTACTAGTAG TAAATCAAAG GCTGCTTTAC GGGAATTAGG TACACACCCA
GAAGACGATG CACCTATAAA CATCTATGAC GGCCCCTATG GCCCTTATAT TAAACATGGT
AAGACCAATG TAGGTCTTCC TGAAGGAACA TCTGTCGAAG ATGTAACATT AGCTACGGCG
CTAGAATTAC TATCTGCCAA AGCTTCAACC GCTAAAACTA CACGCAAAAC AAGTAAAACT
AGTACAACTA AATCTAAATC AACGGCGAAA TCATCTAGTA CTGCTACGAA AAAAAAGGGG
GCGTAA
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| Protein sequence | MSTLVIVESP TKARTIRNYL PKDYRVEASM GHVRDLPQSA SEIPATVKGE AWAQLGVNVD
ADFEPVYVVP KDKKKVVTQL KEALKDADEL ILATDEDREG ESISWHLYQL LKPKVPTKRM
VFHEITQEAI KKALKDCRNI DEQLVRAQET RRILDRLVGY TLSPLLWKKI AWGLSAGRVQ
SVAVRLLVNK ERQRRAFREG TYWDLKAYLE QSKSPFTAQL TTLAGTKVAT GSDFDASTGR
ITAGRNVVLL TETEAVALQE RLTGKTWNVS EVEERPVTRK PAPPFTTSTL QQESNRKLRL
SARDTMRIAQ NLYEQGYITY MRTDSVHLSE QAIAAARNCV EQLYGKQYLS PQPRQYTTKS
KGAQEAHEAI RPAGSTFRTP QETGLGGREL ALYDLIWKRT VASQMADSRQ TQITVQLQVE
DAGFRASGKR IDFPGYLRAY VEGSDDPEAA LEDQEVILPS LKVGDHPDCK NIEAVGHETQ
PPARYTEATL VKTLESEGIG RPSTYASIIG TIIDKGYSQL VNNALIPTFT AFAVTDLLEK
HFPDIVDPSF TSKMEQTLDD IAEGEAQWLP YLKKFYLGDQ GLETLVRERE SQIDAGKART
VELENLDAKV RIGKYGPYIE VENGDGVVTA SIPKDLTPAD LDPKQVEIIL RQKTVGPDQL
GRHPETGEPI YVKIGAYGPY VQLGDKSDEN PKPKQASLPK GVTPENISLE TAIGLLSLPR
TLGTHPATGG KIQASLGRFG PYVVHDQGKE GKDYRSLKAS DDVLTISLER ALELISEPKK
TRGSTSSKSK AALRELGTHP EDDAPINIYD GPYGPYIKHG KTNVGLPEGT SVEDVTLATA
LELLSAKAST AKTTRKTSKT STTKSKSTAK SSSTATKKKG A
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