Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0023 |
Symbol | |
ID | 3678868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 20934 |
End bp | 22625 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637715350 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_320544 |
Protein GI | 75906248 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.393007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGAGA ATCTTAGAAG CAAGGCTATC ACACAAGGGG TGCAGCGATC GCCTAACAGA GCAATGCTGC GGGCTGTTGG TTTTCAGGAT GCAGATTTTA CCAAAGCCAT TGTCGGTGTT GCCAATGGTT ACAGCACTAT TACCCCGTGT AATATGGGGA TAAATCAACT AGCACAAAGG GCAGAAGCTG GTATAAATCG CGCTGGAGCG AAGCCACAAA TATTCGGTAC AATTACGATT AGTGATGGGA TTTCGATGGG AACCGAAGGG ATGAAATATT CCCTGGTATC ACGAGAGGTA ATTGCTGACT CCATTGAAAC CGTTTGTAAT GGGCAAAGTT TAGATGGGGT AATTGCCATT GGTGGCTGTG ATAAAAATAT GCCAGGGGCA ATGATAGCGA TCGCTCGGAT GAACATCCCT GCTATCTTTG TTTACGGTGG CACAATTAAA CCCGGACACT ACAACGGCAA AGATTTAACT GTTGTTAGTT CTTTTGAAGC TGTCGGTGAG TACAGCGCTG GCAAAATCGA CGAAAATGAA CTGTTAGCAG TAGAACGCAA TGCTTGTCCT GGTGCAGGTT CCTGCGGTGG GATGTACACA GCAAATACTA TGTCCTCTGC TTTTGAAGCA CTGGGAATGA GTTTGCCCTA TTCGTCTACA ATGGCAGCAG AAGACGACGA AAAAGCTGAT AGTACGGAAG AATCAGCCAA GGTATTAGTA GAAGCAATTC GTCATCAGCT ATTACCCAGG CAGATTATCA CTCGTAAATC CATAGAGAAT GCCATAGCAG TAATTATGGC GGTGGGAGGT TCCACCAATG CCGTGTTACA TTTTCTAGCG ATCGCCCGTG CAGCTGGTGT AGAGTTAAAT CTAGACGACT TTGAAACTAT TCGTGGTCGT GTCCCCGTTT TGTGCGACTT GAAACCAAGC GGTAGATATG TAGCTACAGA CCTGCACAAA GCTGGTGGTA TACCCCAAGT CATGAAAATG TTACTTGTGC ATGGTTTACT CCACGGCGAC TGTATAACCA TCACAGGTAA AACCATTGCC GAAGTTTTAG CAGATATCCC AGAAGAACCA TCGCCTAATC AAGACGTGAT TCGTCCTTGG AATAAACCCA TGTATGCCCA AGGTCACTTG GCTATACTCA AAGGTAATTT GGCTACAGAA GGCGCAGTCG CCAAAATTAC AGGTGTGAAA AATCCTGTGA TTACCGGGCC AGCCAAAGTA TTTGAATCAG AAGAAGATTG TTTAGATGCA ATTTTGGCAG GTAAGATTAA AGCCGGAGAC GTGATTGTCG TCCGTTACGA AGGCCCCAAA GGCGGCCCTG GGATGCGAGA AATGTTAGCC CCCACCTCAG CTATTATCGG TGCAGGTTTA GGTGATTCAG TGGGATTAAT TACCGATGGA CGCTTCTCCG GTGGTACTTA TGGGATGGTA GTCGGACACG TTGCACCAGA AGCAGCCGTT GGTGGAGCGA TCGCACTGGT ACAAGAAGGT GATAGCATCA CAATTGATGC CCATACCCGT TCTTTGCAGT TGAACATATC AGACGAAGAA TTAGCCCATC GTCGTGCCAA CTGGCAACCC CGTCCCCCAC GTTACACTAA AGGCATACTC GCAAAATACG CCAAGTTAGT AGCTTCTAGT AGTGTAGGTG CGGTCACCGA TTTAGACTTA TTTAATGAAT AG
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Protein sequence | MSENLRSKAI TQGVQRSPNR AMLRAVGFQD ADFTKAIVGV ANGYSTITPC NMGINQLAQR AEAGINRAGA KPQIFGTITI SDGISMGTEG MKYSLVSREV IADSIETVCN GQSLDGVIAI GGCDKNMPGA MIAIARMNIP AIFVYGGTIK PGHYNGKDLT VVSSFEAVGE YSAGKIDENE LLAVERNACP GAGSCGGMYT ANTMSSAFEA LGMSLPYSST MAAEDDEKAD STEESAKVLV EAIRHQLLPR QIITRKSIEN AIAVIMAVGG STNAVLHFLA IARAAGVELN LDDFETIRGR VPVLCDLKPS GRYVATDLHK AGGIPQVMKM LLVHGLLHGD CITITGKTIA EVLADIPEEP SPNQDVIRPW NKPMYAQGHL AILKGNLATE GAVAKITGVK NPVITGPAKV FESEEDCLDA ILAGKIKAGD VIVVRYEGPK GGPGMREMLA PTSAIIGAGL GDSVGLITDG RFSGGTYGMV VGHVAPEAAV GGAIALVQEG DSITIDAHTR SLQLNISDEE LAHRRANWQP RPPRYTKGIL AKYAKLVASS SVGAVTDLDL FNE
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