Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0022 |
Symbol | |
ID | 3678867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 19248 |
End bp | 20486 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637715349 |
Product | glycosyl transferase family protein |
Protein accession | YP_320543 |
Protein GI | 75906247 |
COG category | [M] Cell wall/membrane/envelope biogenesis [S] Function unknown |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis [COG2246] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.882894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATCA ATAAAACTCA GTCATTGTTG CCAGTACCCG CAGGTAATTT ACAAGTTCCT GAGTTTCCAC CTAGTGATTC GGGTGTGACT GGTCAACCCA TCCAATTTTC TCTCATCATT CCTACTTATA AAGAGAGCGG GAACATTAGG AATGTTGTGG AGAGATTAAG TCAGATACTG GATGAGTTTA TACCAGGAGA TTATGAACTG ATTGTAGTAG ATGATGATAG CCCAGATGGC ACTTGGGAAG TAGCCCTATC TTTGATGGCA GAATATCCAC AGTTACGAGT AATGCGACGG CAGGAAGAAA GAGGACTATC TACAGCTGTA ATTCGTGGAT GGCAGGTAGC TAGAGGTAGT ATTTTGGGAG TAATCGATGG AGATTTACAG CATCCCCCCC ATGTATTGCT GGAACTTTTG CGGAAAATCC ATAAGGGTGC AGATTTAGCT GTAGCCAGTC GTCACGTAGA TGGGGGTGGT GTAAGTAGCT GGAGTTTTAT CAGACGCTTT TTGTCTCGTG GGGCGCAATT ATTAGGACTA GTGATTCTAC CTAGTGTATT GGGTAGGGTT TCCGACCCCA TGAGTGGTTA TTTTATGGTG CGGCGTAACT GTATTACTAA TGCCACCTTC AATCCGGTAG GATACAAAAT TTTATTAGAA GTGATTGGGC GGGGTCAAGT AGACGAAATT GCCGAAGTGG GTTATGTATT TTGTGAACGC CAAGAAGGTG AGAGCAAAGT TACTTGGAAG CAGTATGTAG ATTACATCCA CCATTTAATT CGCTTGCGAC TTTCCACCGG CAGGCTGCAA AGAATTCATC AAAGCTTTCC CTTTGATAAA TTCATCCGTT TTGGTTTGGT AGGGTTGAGT GGTGTGTTTG TGGATATGGT GATACTGTAC CTATTAAGTG ACCCATCAAC ACTAGCCTGG CCACTGACCC GCAGTAAAAT TATTGCCTCA GAAATAGCAA TTTTCAACAA TTTTCTCTGG AATGATGCCT GGACTTTTGC AGATGTATCC ATGCAGCAAC AGCATTGGCA TCAACGGTTG AAGCGATTTT TAAAATTTAA TATTGTTTGT CTGGCCGGGG TAGTGCTGAA TGTACTGATA TTGAATATTA TCTTTAATTA TCTCATTCCT AACCGCTATA TTGCCAACCT GATTGCGATC GCCATAGCCA CTGTTTGGAA CTTTTGGGTA AACTTGCGAC TCAGTTGGCG CGTGACTCAA GTCAAATAA
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Protein sequence | MSINKTQSLL PVPAGNLQVP EFPPSDSGVT GQPIQFSLII PTYKESGNIR NVVERLSQIL DEFIPGDYEL IVVDDDSPDG TWEVALSLMA EYPQLRVMRR QEERGLSTAV IRGWQVARGS ILGVIDGDLQ HPPHVLLELL RKIHKGADLA VASRHVDGGG VSSWSFIRRF LSRGAQLLGL VILPSVLGRV SDPMSGYFMV RRNCITNATF NPVGYKILLE VIGRGQVDEI AEVGYVFCER QEGESKVTWK QYVDYIHHLI RLRLSTGRLQ RIHQSFPFDK FIRFGLVGLS GVFVDMVILY LLSDPSTLAW PLTRSKIIAS EIAIFNNFLW NDAWTFADVS MQQQHWHQRL KRFLKFNIVC LAGVVLNVLI LNIIFNYLIP NRYIANLIAI AIATVWNFWV NLRLSWRVTQ VK
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