Gene Athe_2700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2700 
Symbol 
ID7407064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2848181 
End bp2849353 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content36% 
IMG OID643717059 
ProductCRISPR-associated RAMP protein, Csm5 family 
Protein accessionYP_002574528 
Protein GI222530646 
COG category[L] Replication, recombination and repair 
COG ID[COG1332] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID[TIGR01899] CRISPR-associated RAMP protein, Csm5 family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAGCAG ATAGTTTTGA AAGCAAAACA TACGAGATTG AAGTTCTGAC TCCCACAATC 
ATAGGCGGAC AGGATAAAAT TCAGAGTTTT GAGTTTGTAA GAGAAGGAGA GTACTTGTAC
TTTTTGAACT TTGATAAGCT CTTTGAGCAA AACCTTTTTA AAGATAGCTT CATTGAAGAG
CTTTCTCGAG AGCTTTCGTC AGGTGCAAGG GATTTTAATA TAAAAGATAT TCTGAAAAAA
TATAGCATAG ATTTTAAAAA GGCGGTAAAG TACACTCTTA GACTTGAAGG TGTTACAAGC
CCTTACAGAG AAGTAGTTGC ATTTGTAAAA AGTGCAGGCA GGTTTTACAT TCCGGGTTCA
TCCTTAAAAG GGGCAATGAG GTCTTCTATG ACAAAAGCTC TTTCGAAAAA CCTTTTGCAG
TTTTATGAGA GTGCGCTCTC AAATGCTTAT CAGAAAGTTC TGAATCGAAA CAGAGTTGAC
CCCAAGTTTG TAAGCCGTGA TGCAGATGAG AAGATTTTTG GAACTCCTTA TGAATCGCCG
TTCAAATACC TAAGGGTAAG CGACAGCAGC TTTGTAGGTC AAGAGAGCGC AGGGATTTTT
GAAATAAAAG TTTTGAACAT ATGTTCAAAT CAGCCAAAAT GGTTTTCGAG AAATGGCAAT
ATTGATGATC CAAAGCAGGC AACTGCCATT GTTGCTGAAG GATTGAAACC TGGTGTAAAG
CTTTATGGAA GTATCAAGGT TGAAAAAGAT TTAATCGAAG GAAATGCTGC AGTTAAAGGG
TTAAAGGAGA AGCTTTTGGC AAGCGGATTA TCATCTTCAC CATATGAATT TGTTGCCCAA
ATTTTAAATT CTGTTGCAAA GGATTATATC CAGAAAGAAA TGACCTTTTA CTCTAAATAC
AATCAAAAGC AGATTGTTTC TGAGTATCAA AGACTTTTGA ATATTTTAAA TTCTCTTGAC
AAAAATAAAT TTTTGCTCCA GATAGGATTT TCAACAGGAT ATCTTTCAAA AACTGTGGGA
ATATTTTTCA ATAAGAGCCA TTTTGAAAAA CTTTCAAGGG TAGATACTCA GTCAAAAATC
TATCCTGATA TTTTTCCAAA GTCACGACGT CTTTTGTTTA AGGATGGACA GGTTTGGACA
GTACCCGGCT GGATAAAAGT AACCATTAGA TGA
 
Protein sequence
MAADSFESKT YEIEVLTPTI IGGQDKIQSF EFVREGEYLY FLNFDKLFEQ NLFKDSFIEE 
LSRELSSGAR DFNIKDILKK YSIDFKKAVK YTLRLEGVTS PYREVVAFVK SAGRFYIPGS
SLKGAMRSSM TKALSKNLLQ FYESALSNAY QKVLNRNRVD PKFVSRDADE KIFGTPYESP
FKYLRVSDSS FVGQESAGIF EIKVLNICSN QPKWFSRNGN IDDPKQATAI VAEGLKPGVK
LYGSIKVEKD LIEGNAAVKG LKEKLLASGL SSSPYEFVAQ ILNSVAKDYI QKEMTFYSKY
NQKQIVSEYQ RLLNILNSLD KNKFLLQIGF STGYLSKTVG IFFNKSHFEK LSRVDTQSKI
YPDIFPKSRR LLFKDGQVWT VPGWIKVTIR