Gene Athe_2588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2588 
Symbol 
ID7409542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2726619 
End bp2727821 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content40% 
IMG OID643716952 
Productprotein of unknown function DUF214 
Protein accessionYP_002574426 
Protein GI222530544 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000760178 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGAGC TTATCAAAGT AGCAATAAAG AGCATTTTTT CAAATAAGCT GAGGACATTT 
TTGACCATGT TGGGAATTAT AATCGGTATC GCTTCTGTGA TAACAATTGT ATCTCTGGGT
GAAGGTGGTA AGACAGCCAT TTTGGGCGAA TTTGAAAAAA TAGGCGTGAA TATTTTCTCT
GTCAGACCAC GAACAGATGT GGAGATAACC GAAAGTGACA GACTCACTGT CAAAGATGTT
GAGATGATAC GAAAGAGAGT TTCATCTGTA AAGTATGCTG CTCCAGTTGC CCAAAAGTTT
GGACTTGTCA AGTCTGGAAA AAGAACCAAA AAAGCTATTT TTATCGCAAC AGACTTTGAC
TACGGTAATG TCTCAAACTT GAAAATTATA TACGGAAGAT TTTTGAACGA AAGAGATATC
CTGCTTGGTC GAAATGTTGT TTTGATTGAT AGAGAGTCGG CAAAAGAGCT ATTTGGATAC
GAAGACTGTG TTGGTCAGAC CATAAAGGTG GGGTCTTCCA CATCCTTTGA TACCGCAAAG
ATAATTGGTG TGATAGACAG CGGCAGCTAC AGGGTTTTGG GCGGAGCTGC AGCTGATCAG
TTTCCTGTTA TTGCTGCAAT GCCAATAACC TACGCACAAA AGATATTTGA TGATGTGACC
ATCTCACAGA TTTACGTAAT GACTTACAAT TCAGACCAGC TTGATGAGGC AACATCTCAG
GTAGTGAGAC TTTTAGAGTT GAGACATCAC AACAAAGACA AGTATAAAAC AGAAAACTTT
GTAAATTTCA TGGAGCAATT TGAAAGAATA CTTGGTATTT TTACAACTGT AATGAGTGCA
ATCGCAGCAA TATCTCTGGT GGTTGGCGGA ATTGGAGTTA TGAACATAAT GCTTGTTGCT
GTGACAGAAC GAACGAGGGA GATAGGAATC AGAAAAGCAA TCGGTGCAAC ACAAAGAGAC
ATCCTGGTAC AGTTTTTAAT TGAGGCACTT TTGATATCTC TTATAGGCGG CAGTATAGGT
ACACTTTTGG GCTATCTTCT CGCAAATTTG GTAGGCCCAT TTATTCAAAT TACCCCTGTT
GTGTCGCTGA AGACAATTTT AATAGCTTTT GCGTTCTCGT CGGCTGTTGG AATCTTCTTT
GGGATTTACC CTGCAAAAAG AGCAGCACAG CTCGATCCAA TCGTTGCTCT GCGGTATGAG
TGA
 
Protein sequence
MRELIKVAIK SIFSNKLRTF LTMLGIIIGI ASVITIVSLG EGGKTAILGE FEKIGVNIFS 
VRPRTDVEIT ESDRLTVKDV EMIRKRVSSV KYAAPVAQKF GLVKSGKRTK KAIFIATDFD
YGNVSNLKII YGRFLNERDI LLGRNVVLID RESAKELFGY EDCVGQTIKV GSSTSFDTAK
IIGVIDSGSY RVLGGAAADQ FPVIAAMPIT YAQKIFDDVT ISQIYVMTYN SDQLDEATSQ
VVRLLELRHH NKDKYKTENF VNFMEQFERI LGIFTTVMSA IAAISLVVGG IGVMNIMLVA
VTERTREIGI RKAIGATQRD ILVQFLIEAL LISLIGGSIG TLLGYLLANL VGPFIQITPV
VSLKTILIAF AFSSAVGIFF GIYPAKRAAQ LDPIVALRYE