Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_2423 |
Symbol | |
ID | 7408047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | - |
Start bp | 2569470 |
End bp | 2570102 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643716786 |
Product | putative RNA polymerase, sigma 70 family subunit |
Protein accession | YP_002574264 |
Protein GI | 222530382 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0647995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGTTTG CAATGTTTGA GCTGAGTTTC GATGAACAAA AAGAATTGAT TGGCAGAATA AAGAAAGGGG ACAAAGAAGC CGCTGAAACA CTTATTATGG CATATGAGCC TTTAATTATA TCACTTGCCG CTAAATACAA CAAACCCGAC ATCTTTGAAG ACTTGAAGCA GGAAGGTGCA GTAGCAATCC TGCAGGCTGC CCAAAAGTTT GATGAGAGCT TGGGCGTCTC GTTTGTAACC CTCGCAATAT ACTATATCAA ACGCAATATG GACAGATGTA CCAACAAAAG CAGAACAATA AGACCACCGT TTAATAAACC CAATACTGAA ATCCCGCAGG TGATTTCAAT GGAATCTGTT ATTAATACTA ACAGTCATGC TGATGATGAA GAGCTAAAAG TTAAGGACAC TGTTCAAGAT ACTGCTAATG TTGAAGAGCA AGCAATGTAC AATGAAACTC TGCAAAGACT TATTAAAATG CTTTCAGACG AAGAAAGGAA AATTCTGTTA CTGCGACTCA AACAATACAG CTTCAAGGAA ATTGCAAAGG AGTTAGGACT GACTGAAAAG CAAGTTGCTA CAAGAGCACA AAAAATCCGT ACTAAACTCC AGTGTCTCCT GAAAGCATCG TAG
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Protein sequence | MKFAMFELSF DEQKELIGRI KKGDKEAAET LIMAYEPLII SLAAKYNKPD IFEDLKQEGA VAILQAAQKF DESLGVSFVT LAIYYIKRNM DRCTNKSRTI RPPFNKPNTE IPQVISMESV INTNSHADDE ELKVKDTVQD TANVEEQAMY NETLQRLIKM LSDEERKILL LRLKQYSFKE IAKELGLTEK QVATRAQKIR TKLQCLLKAS
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