Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_2380 |
Symbol | |
ID | 7407799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | - |
Start bp | 2531442 |
End bp | 2532785 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643716743 |
Product | Galacturan 1,4-alpha-galacturonidase |
Protein accession | YP_002574222 |
Protein GI | 222530340 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5434] Endopolygalacturonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTACA ATGTTTGTAA TTTTGGTGCG AAAGGAAACG GAGTAGATAA AGACACAGAA GCGTTTAAAA AAGCAATTGA GGTATGTGAA AAAAACGGTG GTGGAACAGT TTATGTTCCC GCTGGTATTT ATCATATAGG TGCACTACAT CTTAAAAGTA ACATGACACT TTATATTGAA AGCGGTGCTG TGCTGAAATT TTCACAGGAT GAAGAAGACT ATCCACTTGT ATACACAAGA TGGGAAGGCG AAGAGATGCA GGTTTACTCT CCACTGATAT ATGCAGAAGA TGCAGAAAAT GTTGCAGTAG TGGGGTTTGG CACAATTGAT GGACAGGGCG AAAAGTGGTG GCGTCTTCAC AGAAATAAAG AGTTAAAATA TCCAAGACCT CGTTCTATCT GTTTTTACAG GTGTAACAAC GTTACTATCG AAGGAATAAA GATTATAAAC TCTCCAAGCT GGACGGTAAA TCCCATAGAG TGCCAGAATG TTACAGTTCA CAATATAAAG ATTCAAAATC CATATGATTC ACCAAACACA GATGGGATAA ATCCGGAGTC ATGTAAAGGC GTCAGAATAT CAAACTGCTA CATAGATGTT GGTGATGATT GTGTGACGCT AAAGTCTGGA ACAGAAGACT GCAAAGAAAG AATACCTTGT GAGAATATTA CAATAACAAA CTGTATAATG GCACACGGTC ATGGCGGTGT TGTTATCGGA AGTGAGATGA GTGGCGGTGT TCGGAATGTT GTTATTTCAA ACTGTATTTT TGAAGGCACA GACAGAGGAA TAAGAATAAA GACAAGAAGA GGTCGTGGAG GAGTTGTTGA GGATATAAGA GTTTCGAACA TTGTAATGAA AAATGTTATG TGCCCATTTG CATTTTACAT GTATTACCAT TGCGGTAAAG GTGGAAAAGA AAAGAGAGTT TGGGATAAGT CTCCATATCC TGTTGATGAT ACAACACCAG TTGTTAGAAG AATATATATA AGTGATGTTG TTGTAAGGCA GGCAAGAGCA GCAGCAGGAT TTTTATATGG ACTTACAGAG ATGCCAATTG AGGATGTTGT GTTTTCTAAT GTTACTGTTG AGATGGCTCA AAACCCTGAA CCAGAACTTC CAGCAATGAT GAGTTATTTA GAGCCAATGG CTAAAAGAGG GTTTGTCATA AATACTGTAA AGAACATAAG ATTTATGAAT GTTACTGTAC TGGAACAGGA AGGTGCTGCT TTTGAACTTA ACAATTGTGA GAATGTAGAG TTTTACAGAT GCAGGGCAAA AGATACAGCA GATTATTCTA AGATTTTGAG TCTGAACAAT ACAATGAATC TGATTGCTGA GTAG
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Protein sequence | MIYNVCNFGA KGNGVDKDTE AFKKAIEVCE KNGGGTVYVP AGIYHIGALH LKSNMTLYIE SGAVLKFSQD EEDYPLVYTR WEGEEMQVYS PLIYAEDAEN VAVVGFGTID GQGEKWWRLH RNKELKYPRP RSICFYRCNN VTIEGIKIIN SPSWTVNPIE CQNVTVHNIK IQNPYDSPNT DGINPESCKG VRISNCYIDV GDDCVTLKSG TEDCKERIPC ENITITNCIM AHGHGGVVIG SEMSGGVRNV VISNCIFEGT DRGIRIKTRR GRGGVVEDIR VSNIVMKNVM CPFAFYMYYH CGKGGKEKRV WDKSPYPVDD TTPVVRRIYI SDVVVRQARA AAGFLYGLTE MPIEDVVFSN VTVEMAQNPE PELPAMMSYL EPMAKRGFVI NTVKNIRFMN VTVLEQEGAA FELNNCENVE FYRCRAKDTA DYSKILSLNN TMNLIAE
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