Gene Athe_2296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_2296 
Symbol 
ID7407715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2429823 
End bp2431001 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content43% 
IMG OID643716660 
Productprotein of unknown function DUF214 
Protein accessionYP_002574139 
Protein GI222530257 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTCAGT TTGCTTTGGC TTTCAAGATG GCAATAAAGA GCATCCTTTC AAATAAGCTA 
AGGTCTTTTC TTACTATGCT TGGCGTCATC ATTGGTATCT GGGCAGTAAT TGCGGTTGTT
GGGCTTGCCC AGGGAAGCAC CAAAAGCATA ACAGACAGGC TGCAAAGGCT TGGAACAAAT
CTCATTCAAA TAAACATCAC AGGAAGAAAC AGTAACAGAA ACGTCACATA TGAAGAGCTT
CAGCAGTTTG CCGAGCAGCA CGCAGAGGAT ATTGAGGCAA TCGCACCAAC TGTATCGAGC
TCTGTCACGC TCAAGTATGG GACAAACACC CACGATACGA CCCTCATTGG AACAACAGCA
GACTACAGCC TTGTGAGAGA CGTCAACGTC AGCAGCGGAA GGTTTATTTT GCCAATTGAT
GTAGACTATC GTCAAAAGGT TGCGCTTGTT GGGACGTACA TCGTAAAGGA TTTATTTAAC
GGGCAAAACC CGATAGGGAA AAAGATAAAG ATAAACGGGC AGATATTCAC AGTTGTTGGT
GTTTTAGAAG AGCGGGCAAA TTCGCAGGAG CAGTCAGACG ATGACCAGGT GATAGTCCCT
GTAACAGTTG CACAAAGGCT CACACGAAAC GCAATAATCC GAAACTTTGC GATAAAAATC
ACGGATGGTA ACAGAAGTGA AGTTGTAATG AACTATCTCA ACGATTTTCT CATGAAGATT
TACAACGACT CTACAGCTTT TAGAGTTTTC AACACAGCCC AGCTACTTGA CACATTAAAC
AGTGTAACCC AGACACTCAC GCTTATGCTT GCCGGAATTG CTGCAATTTC GCTCATTGTC
GGTGGAATTG GCATCATGAA CATCATGCTT GTGTCTGTGA CAGAGAGGAC AAGAGAGATT
GGAATCAGAA AAGCAATCGG CGCAAAGAGG AGAAACATAC TTGTTCAGTT TTTGATAGAA
GCATCTGTTG TGACAGGACT TGGTGGAGTG GTGGGTATAA TACTGGGATT TGTGACAATA
AGAGTAATGT CAAAACTTAA TATTGCAACA GCCATATTCT CAATACCATG GGCTATTCTT
GCGTTTACAA TTTCACTTGC TATAGGGATA GTCTTTGGAC TGTTCCCGGC ATCAAAAGCA
TCGCGCCTCA ACCCGATAGA AGCGTTAAGA TACGAATAA
 
Protein sequence
MAQFALAFKM AIKSILSNKL RSFLTMLGVI IGIWAVIAVV GLAQGSTKSI TDRLQRLGTN 
LIQINITGRN SNRNVTYEEL QQFAEQHAED IEAIAPTVSS SVTLKYGTNT HDTTLIGTTA
DYSLVRDVNV SSGRFILPID VDYRQKVALV GTYIVKDLFN GQNPIGKKIK INGQIFTVVG
VLEERANSQE QSDDDQVIVP VTVAQRLTRN AIIRNFAIKI TDGNRSEVVM NYLNDFLMKI
YNDSTAFRVF NTAQLLDTLN SVTQTLTLML AGIAAISLIV GGIGIMNIML VSVTERTREI
GIRKAIGAKR RNILVQFLIE ASVVTGLGGV VGIILGFVTI RVMSKLNIAT AIFSIPWAIL
AFTISLAIGI VFGLFPASKA SRLNPIEALR YE