| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_2177 |
|---|
| Symbol | |
|---|
| ID | 7408370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | - |
|---|
| Start bp | 2304738 |
|---|
| End bp | 2305532 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643716542 |
|---|
| Product | transcriptional repressor CodY |
|---|
| Protein accession | YP_002574025 |
|---|
| Protein GI | 222530143 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4465] Pleiotropic transcriptional repressor |
|---|
| TIGRFAM ID | [TIGR02787] GTP-sensing transcriptional pleiotropic repressor CodY |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.494459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAGA GTCTTCTTGA AAAAGTTCGG AAACTCAACA GAGTTATCCA AAGTAAGGAC
AAAGAAGTCT TGGATTTTGA AAAGCTGTGC TCTGTTGTTG GTGATGTGAC AGATTCGAGT
GTATTTTTTA TAGACAAGGA TGGCAAAGTC ATTTGCAAAT ACATCATGCC TTTTGTGAAT
GTGGATATAA AGCTTTCTGA AGAAAAAAAG ATAGGTGATA ATCTTCAAAA ATTTTTCTGG
TGGTTTGTGG ATACAAGAGC CAATATGAAG TTTTCAGACA TCACCAAGAT TGCTGAAATT
GAGAGCAAAG TTGGTAGCGA AAACGACCTG CTGTGTACAT CTGTCCCTGT GATTGGCGGG
GGCAGGAGAT TCGGCACAGT TTTGGCGTTC AAAAGTTTTT CATCTTTTAC AGAAGAGGAT
ATAATTGTTC TTGAATATGC CTCTACTGTG CTTGGGCTTG AACTTTTGAA TCTTTCCAAA
GAAGAAGATG AAGAAGAAAA GAAAAAAAGA GAGATGATAA AATCTGCAAT TGAGACACTT
TCTATGTCTG AGCTTGAAGC ACTTGTGCAT ATTTTTGATG AGTTAAAAGG AAACGAAGGG
CTTTTGGTTG CAAGCAGAAT TGCTGATAAA GTTGGAATTA CACGTTCTGT CATTGTAAAT
GCTCTAAGAA AATTTGAGAG TGCAGGTCTT ATAGAGACAA GGTCGCTTGG ACTTAAGGGC
ACGTATATAA AGGTGTTAAA TGAAATGATA AGGGATGAGA TAGAAAAACA AAAAGAAAAC
CTAAAGTTAA AGTGA
|
|---|
| Protein sequence | MQQSLLEKVR KLNRVIQSKD KEVLDFEKLC SVVGDVTDSS VFFIDKDGKV ICKYIMPFVN
VDIKLSEEKK IGDNLQKFFW WFVDTRANMK FSDITKIAEI ESKVGSENDL LCTSVPVIGG
GRRFGTVLAF KSFSSFTEED IIVLEYASTV LGLELLNLSK EEDEEEKKKR EMIKSAIETL
SMSELEALVH IFDELKGNEG LLVASRIADK VGITRSVIVN ALRKFESAGL IETRSLGLKG
TYIKVLNEMI RDEIEKQKEN LKLK
|
|---|
| |