Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_2155 |
Symbol | |
ID | 7408348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | - |
Start bp | 2287595 |
End bp | 2288377 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 643716520 |
Product | flagellar biosynthetic protein FliR |
Protein accession | YP_002574003 |
Protein GI | 222530121 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.71741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATA TTATTAACGC TTTTTTAAAT AGTTCATATA TATTTTTTCT TGTACTTGCA AGGATGAGTG GTCTTTTTAT AGTCTCACCA ATATTTGGTA GAAGAAATAT ACCTGCGTAT TTTAAAATTG GTTTTGCTTT TTTCTTAAGC TTACTTGTTG TCTCAACTTA CAGATTTTCT TACAGTGCAC CTTCCAATTT GCTGGAGTAT ATATTTGTAG TGATTAAAGA ATTCATTGTT GGGCTTTTGA TAGGGTATAT ATCATACATG ATATTTTCAG CTATACTTTT GGCGGGTCAA ATCATTGACA ATGCAATAGG TTTTGGTATG GCAAACGTCA TTGACCCTAT GAGTGAGGTT CAGGTTCCTC TTTTAGGAAA CTTTTTATAC CTTTATATGC TTGTTGTCTT TTTTGGAACA GACGCTCATC ATCTTCTTAT AAGAGCTGTA ATTTATAGCT ACAAGCTTGT ACCTATTGGA TATGAAGGTT TTAGAAGAGA ATTTACTTGG AATTTTTTTA GATTTTTTTC AGAGCTTTTC TTGATAGGGG TTGAGATAAG CCTGCCAATT TTAATGAGCA TGCTTATTGT GGACATAATT TTAGCTGTGT TGTCACGAGC AGTTCCACAG ATGAATGTGT TCATGGTAGG GCTTCCTATA AAGATTGCAA TTGGTTTTTT GGTGCTTGTT ATAATTTTTC CTTTCATGAA CAAGATGATA TTTGTACTAA TTGACAAAAT AGCTGTATAT ACTTTTGAAA CCTTGAGAGG GGGTATCAGG TGA
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Protein sequence | MTDIINAFLN SSYIFFLVLA RMSGLFIVSP IFGRRNIPAY FKIGFAFFLS LLVVSTYRFS YSAPSNLLEY IFVVIKEFIV GLLIGYISYM IFSAILLAGQ IIDNAIGFGM ANVIDPMSEV QVPLLGNFLY LYMLVVFFGT DAHHLLIRAV IYSYKLVPIG YEGFRREFTW NFFRFFSELF LIGVEISLPI LMSMLIVDII LAVLSRAVPQ MNVFMVGLPI KIAIGFLVLV IIFPFMNKMI FVLIDKIAVY TFETLRGGIR
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