Gene Athe_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1940 
Symbol 
ID7407354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp2047729 
End bp2048520 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content40% 
IMG OID643716312 
ProductABC transporter related 
Protein accessionYP_002573800 
Protein GI222529918 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00554331 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACG GTAATGCAGT AAATAACAAT AGTAAAAAGA TAATAATTGC AAAAGAGATT 
GTTAAATATT TCGGGCACAA TCTTGTGCTG GACAAGGTGT CCTTGGAGGT AAACAGAGGA
GAAGTTGTGG TTATAATAGG ACCATCGGGG TCTGGCAAGA GCACTTTCTT GCGCTGTCTT
AACCATTTAG AGAGAATCAA TTCAGGGTAT ATTGAAATTG ACGGGTTTGT CATCGAAGAC
AAGGGGCTGC ATGAAAAACA CAAAAAACAT AGCTCAAAAG AGATAGCAAG ATTTTGTTCA
CAAATAGGTA TGGTATTTCA AAGATTTAAC CTGTTTCCTC ACATGACAGC ACTTGAGAAC
GTGATAGTTG GACCTGTTGT TGTAAATAAA ATGAAAAAAG AAGAGGCAGT GGAGCTTGGG
CTTGAGCTTC TTGAAAAGGT GGGGCTCAAG GACAAGGCAA ATTCATACCC TTCGCAGCTT
TCTGGTGGAC AGCAGCAAAG AGTTGCAATT GCCAGAGCTT TAGCTATGAA GCCAAAAGTA
ATGCTGTTTG ATGAACCGAC ATCTGCACTT GACCCTGAAC TTGTGGGTGA GGTTTTGAAT
GTTATGAAAG AGCTAGCAAG GGAAGGTATG ACAATGCTTG TTGTGACTCA TGAGATGGGA
TTTGCAAGAG AGGTTGCAGA TCGAGTTGTT TTTATGGATA AAGGGAAGAT TGTGGAAGAA
GGATTGCCTG AAGAAATTTT CACAAATCCA AAACAAGAGA GGACAAAACA GTTTTTACAA
AAGATACTGT AA
 
Protein sequence
MNNGNAVNNN SKKIIIAKEI VKYFGHNLVL DKVSLEVNRG EVVVIIGPSG SGKSTFLRCL 
NHLERINSGY IEIDGFVIED KGLHEKHKKH SSKEIARFCS QIGMVFQRFN LFPHMTALEN
VIVGPVVVNK MKKEEAVELG LELLEKVGLK DKANSYPSQL SGGQQQRVAI ARALAMKPKV
MLFDEPTSAL DPELVGEVLN VMKELAREGM TMLVVTHEMG FAREVADRVV FMDKGKIVEE
GLPEEIFTNP KQERTKQFLQ KIL