Gene Athe_1810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1810 
Symbol 
ID7408597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand- 
Start bp1885042 
End bp1886208 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content37% 
IMG OID643716187 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_002573676 
Protein GI222529794 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0615347 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAGA GCATTTGCAT CCTTGGGTCA ACTGGGTCTA TAGGTGTTCA GACAATAGAT 
GTTGCAAAAA AGCTTGGGAT TAAAGTTGTG GGACTTTCAG CGCACAAAAA TGTGGATCTT 
TTAATTAAGC AAGCAAGAGA GCTTAACCCT GACATTTTAT GTATTGTAGA TGAAAAGTAC 
TACACTGTAT TAAAAGAAAA TTTTCCTGAT AAGATAGTTG TAACAGGTCA TGAAGGGCTA 
ATTAGCATTG CAACATATCC AGCAGCAGAT TTGATTGTAA ATGCACTTAT TGGTATATCT 
GGTTTGGTGC CGACAGTTGA GGCTATTTTG GCAGGTAAAA GAGTTGCTCT TGCCAACAAA 
GAGACGCTTG TGACAGGTGG AAAGATTATA AAAAGGATTC TTTCCCAAAA ACAAGCAAAA 
GATTCTATCC CTGTTCTTAT TCCTGTTGAC TCAGAACACA GTGCTATTTT CCAGTGCCTT 
GTAGGTGAAG ACAAAAAAAA TATAAAAAAG ATAATTCTCA CAGCATCAGG AGGACCTTTT 
AGGGGCAAAA AACTCAAAGA CTTACAAAGC GTCAATGTAG AAGATGTGCT GAAGCATCCT 
ACGTGGAACA TGGGTAGGAA AATCACGGTT GACTCAGCCA CCCTGATAAA CAAAGGCTTT 
GAAGTGATAG AAGCCATGTT TTTCTTTGAT AAAAAATGTG ATGATATTGA TGTTGTTATA 
CATCCTCAAA GTATTATTCA TTCAATGGTT GAATTTATTG ATGGATCAGT AAAAGCACAG 
CTATCTTATC CTGATATGCG TCTTCCGATT GAATATGCGC TTACTTTTCC CGAAAGAGGC 
AAAGCAGTAG CTGCGCCACT TGACCTTGCA AGAGTAAAAA ACCTTACATT TGAAGAGCCT 
GATTTTGATA CATTCTTTTT GCTCAAAATT GCATATGAGT GTGCAAAAAA AGGAGAAAGT 
TACCCGATTG TGCTCAATGC TGCCAATGAA GAGGCTGTAA AATATTTCTT GGAAGGGAAA 
ATTGGCTTTG TTGATATTAT GAAGTATGTA GCTAAAAATA TTGAAAGTCA CAGGGGGCAA 
AAAGTGGAAT CCATTCAGGA CGTTTTGGAA ATTGATGCAG AGGCAAGGCA GAAGTTTAAA 
AATCTTGTGG AAGGTGAGAA AAACTAA
 
Protein sequence
MTKSICILGS TGSIGVQTID VAKKLGIKVV GLSAHKNVDL LIKQARELNP DILCIVDEKY 
YTVLKENFPD KIVVTGHEGL ISIATYPAAD LIVNALIGIS GLVPTVEAIL AGKRVALANK 
ETLVTGGKII KRILSQKQAK DSIPVLIPVD SEHSAIFQCL VGEDKKNIKK IILTASGGPF 
RGKKLKDLQS VNVEDVLKHP TWNMGRKITV DSATLINKGF EVIEAMFFFD KKCDDIDVVI 
HPQSIIHSMV EFIDGSVKAQ LSYPDMRLPI EYALTFPERG KAVAAPLDLA RVKNLTFEEP 
DFDTFFLLKI AYECAKKGES YPIVLNAANE EAVKYFLEGK IGFVDIMKYV AKNIESHRGQ 
KVESIQDVLE IDAEARQKFK NLVEGEKN