Gene Athe_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1793 
Symbol 
ID7408580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp1866055 
End bp1866612 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content35% 
IMG OID643716170 
Productcell wall hydrolase SleB 
Protein accessionYP_002573659 
Protein GI222529777 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID[TIGR02869] spore cortex-lytic enzyme 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAA TCTTAAAAAG ATATTCATTT TTTCTCCTGC TTCTTTTTAT AAGTTTTATC 
CTCAGCATTT ATTCTGCAAA ACTTATTTAT GATATAAAAA GGTCAAGTTA CGAAAAAATT
GAGAAAAGAC TTGAAAAGGC ATTGGAAAGT ACTGACAAAG AAGTTTTAAA CCAATCTATT
GAAACACAGA GTTCAACAAG CTACCAAAAC AAAGATTTAT ATCTTTTGGC CAGAGTTATA
AATGGTGAAG CAAGAGGAGA ACCTTATATA GGTCAGGTTG CAATTGGTGC TGTAATTATA
AACAGAACAA AACACCCTGG ATTTCCAAAG ACAATCAGCG GTGTAATCTA TCAGCCGGGT
GCCTTTACTT GTGTATCTGA CGGGCAGATT AACGCAAAAC TTGAACCGAC AGCTTTGAAA
GCCGCAAGAG ATGCGTTAAA TGGTTGGGAC CCGACAAACG GTTGTATATA TTACTACAAT
CCTGCAAAGA CGACAAATAA ATGGATTTGG AGCAGAAAAG TTATGCTTGT CATTGGCAAG
CACAGATTTG CAAAATAA
 
Protein sequence
MSKILKRYSF FLLLLFISFI LSIYSAKLIY DIKRSSYEKI EKRLEKALES TDKEVLNQSI 
ETQSSTSYQN KDLYLLARVI NGEARGEPYI GQVAIGAVII NRTKHPGFPK TISGVIYQPG
AFTCVSDGQI NAKLEPTALK AARDALNGWD PTNGCIYYYN PAKTTNKWIW SRKVMLVIGK
HRFAK