Gene Athe_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1712 
SymbolmnmA 
ID7409227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp1801996 
End bp1803078 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content37% 
IMG OID643716088 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_002573579 
Protein GI222529697 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00334808 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGAAAA AAGTCCTGGT TGCTATGAGT GGAGGTGTAG ATTCTTCTGT TGCAGCTGCA 
ATCCTGAAAG AAGAAGGGTA TGAAGTATAT GGAGCAACAA TGCAGATTTG GCAAACCGAA
ACTGAAGATG AGCTAATTCG CGAAAAGAGC TGTTGTTCTC TTACTGCTGT TGACGATGCA
CGAAGGGTAG CTCATATTCT TGACATACCA TATTATGTCT TTAATATGAA AGATGATTTT
AAAAAAGAGG TCATAAACTA CTTTGTCGAC GAATATATAA AAGGCAGAAC GCCAAATCCT
TGCATTATGT GTAATAGGAA AATCAAGTTT GAGCTTTTTT TAAAAAAGGC AATGGTGCTT
GGCATGGATT ACATTGCAAC AGGTCATTAT GCCATAATAG AATACGATAA AAGTCTATAT
AGATATATCT TGAAAAGGTC AAAAGCAAGA GAAAAAGACC AAACTTATGT GCTTTACAAC
ATGACCCAGG AGATGCTTTC TAAAACAATT TTCCCACTTG GTAGATTTTC CAAAGATGAG
GTTAGAAAGC TTGCAGAGAA ATTTAAACTT CCTGTTGCAA GAAAACCTGA CTCACAGGAG
ATTTGTTTTA TCCCTGACAA TGACTATGGA AGTTTTATTG AAAAAGAGAC AGGAATAAAT
GATGAAGGGG TGTATGTTGA TACTGAGGGA AATATACTTG GCAAGAGCAA AGCGTATTAC
AATTACACCA TCGGTCAGAG AAAAGGACTT GGCATTTCTA CTGGGAAAAG GATGTATGTA
GTTGATATAA AACCTGAGGA GAACAAAGTT GTTTTGGGAG AAGAAGACAA AGTATTTTCG
GATGGTTTAA TTGCTTCTGA TTTGAACTTT ATACTATTTG ATAAATTGGA ATCTGAGTTA
GAAGTGACAG CAAAGATACG ATATACTGCA AAAGAGGCAA AGGCAAAAGT TATACCTGTG
CAGAATAATA AAGTCTTGGT TAAGTTTTAT GAAAAACAGC GTGCCATAAC ACCAGGGCAG
TCTGTGGTGT TCTATAGCGG CGATATTGTT GTTGGCGGCG GAATAATAGA AAAAGCCCTC
TGA
 
Protein sequence
MKKKVLVAMS GGVDSSVAAA ILKEEGYEVY GATMQIWQTE TEDELIREKS CCSLTAVDDA 
RRVAHILDIP YYVFNMKDDF KKEVINYFVD EYIKGRTPNP CIMCNRKIKF ELFLKKAMVL
GMDYIATGHY AIIEYDKSLY RYILKRSKAR EKDQTYVLYN MTQEMLSKTI FPLGRFSKDE
VRKLAEKFKL PVARKPDSQE ICFIPDNDYG SFIEKETGIN DEGVYVDTEG NILGKSKAYY
NYTIGQRKGL GISTGKRMYV VDIKPEENKV VLGEEDKVFS DGLIASDLNF ILFDKLESEL
EVTAKIRYTA KEAKAKVIPV QNNKVLVKFY EKQRAITPGQ SVVFYSGDIV VGGGIIEKAL