Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_1632 |
Symbol | |
ID | 7409462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 1730538 |
End bp | 1731206 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643716001 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_002573499 |
Protein GI | 222529617 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0239259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAATTT ATAATGTTCA GGATTTTATT GCGCAGAAAT TTTCCCAGAT AGCGCAAAGA ATATCAAGCA AAACTAACCT GCCCCAAAAT TTTAAAGATA TATTTGTGAA GAGTTTTGAA AATGCCGTTC AAACAACCAA TGTAGAAACT GATACACCAA TTTTGAGCAT ACAGACAAAA GCTGCAGATA TTATTTTGAA CAAAAGACTT GGCAGCTACA ACCTGCAAAG CTCAAGCTAT TCTTTTGAGC CTTCGACCGA CAAATTTAAT CTTAGCAAAG ACGATATAAT ATCAATCGCA ACACAAAAGG CAAAACAATA TGGAGTTTTG CCAAGCCTTG TCTTGAGCGT AATTGAAGCA GAATCAGGTT TTCGTCAAGA TGCAGTCTCA AAGGCTGGCG CAATTGGTCT TATGCAGCTT ATGCCTCAAA CTGCAAAATC TCTTGGTGTA AACCCATATG ACCCTATAGA AAACTTAGAC GGTGGGATAA GATATTTGAA GGAAAAGATT GAAGAGTTTG GTGGAAACAT TGAACTTGCG CTGGCAGCTT ACAATGCAGG TCCAGCAAAT GTTTTAAAGT TTGGTGGAAT TCCACCGTTT GATGAGACTA TAAACTACGT TCAAAGGGTG CTTTTGCTTT CTCGAAAATA CAGAGAATAT GATGTATAA
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Protein sequence | MLIYNVQDFI AQKFSQIAQR ISSKTNLPQN FKDIFVKSFE NAVQTTNVET DTPILSIQTK AADIILNKRL GSYNLQSSSY SFEPSTDKFN LSKDDIISIA TQKAKQYGVL PSLVLSVIEA ESGFRQDAVS KAGAIGLMQL MPQTAKSLGV NPYDPIENLD GGIRYLKEKI EEFGGNIELA LAAYNAGPAN VLKFGGIPPF DETINYVQRV LLLSRKYREY DV
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