Gene Athe_1632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1632 
Symbol 
ID7409462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp1730538 
End bp1731206 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content37% 
IMG OID643716001 
ProductLytic transglycosylase catalytic 
Protein accessionYP_002573499 
Protein GI222529617 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0239259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAATTT ATAATGTTCA GGATTTTATT GCGCAGAAAT TTTCCCAGAT AGCGCAAAGA 
ATATCAAGCA AAACTAACCT GCCCCAAAAT TTTAAAGATA TATTTGTGAA GAGTTTTGAA
AATGCCGTTC AAACAACCAA TGTAGAAACT GATACACCAA TTTTGAGCAT ACAGACAAAA
GCTGCAGATA TTATTTTGAA CAAAAGACTT GGCAGCTACA ACCTGCAAAG CTCAAGCTAT
TCTTTTGAGC CTTCGACCGA CAAATTTAAT CTTAGCAAAG ACGATATAAT ATCAATCGCA
ACACAAAAGG CAAAACAATA TGGAGTTTTG CCAAGCCTTG TCTTGAGCGT AATTGAAGCA
GAATCAGGTT TTCGTCAAGA TGCAGTCTCA AAGGCTGGCG CAATTGGTCT TATGCAGCTT
ATGCCTCAAA CTGCAAAATC TCTTGGTGTA AACCCATATG ACCCTATAGA AAACTTAGAC
GGTGGGATAA GATATTTGAA GGAAAAGATT GAAGAGTTTG GTGGAAACAT TGAACTTGCG
CTGGCAGCTT ACAATGCAGG TCCAGCAAAT GTTTTAAAGT TTGGTGGAAT TCCACCGTTT
GATGAGACTA TAAACTACGT TCAAAGGGTG CTTTTGCTTT CTCGAAAATA CAGAGAATAT
GATGTATAA
 
Protein sequence
MLIYNVQDFI AQKFSQIAQR ISSKTNLPQN FKDIFVKSFE NAVQTTNVET DTPILSIQTK 
AADIILNKRL GSYNLQSSSY SFEPSTDKFN LSKDDIISIA TQKAKQYGVL PSLVLSVIEA
ESGFRQDAVS KAGAIGLMQL MPQTAKSLGV NPYDPIENLD GGIRYLKEKI EEFGGNIELA
LAAYNAGPAN VLKFGGIPPF DETINYVQRV LLLSRKYREY DV