| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1512 |
|---|
| Symbol | |
|---|
| ID | 7408172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | - |
|---|
| Start bp | 1599531 |
|---|
| End bp | 1600640 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643715876 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_002573383 |
|---|
| Protein GI | 222529501 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.179387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGGAT TTTCAGCAAG AAGGTTCTTT GCTATTGCTA AAAAAGAATT TATTCAAATA
AAAAGAGACA AAGCAAGTTT TGTTTTGGCA TTTGTAGCAC CGTTTATTAT GCTTATGCTC
TTTGGATACG CTGTTAAAAT GGATATAGAG AATGTTGTAA TCGGCATACT TGATATGTCA
AATACACTTG AAAGCAGAGA AATTATTAAA AAACTCCAGA ATACCAGGTA TTTTAAGCCA
GATTTGTTTG CGCAGAATCA GAAAGAAATT GATGAGTGGC TTGACAGTGG AAAAATTAAA
GCTGCCCTGA TTATTCCTTC AAATTTTTCT ACAAAGCTAA AGCAAAAAAG AAGTCCACAA
ATTTTATTCA TTGTTGATGG CACAGACCCA ACAATAGCAA AGACAGTATT TACAAGTGGT
ATTTTAACAA TACAAAATAT GTATAACCAA AGTATTTTAA ATAAGCCTTT TATTGATTTG
AGAACAAGAG TTAAGTACAA CCCTTCAATG AAAAGTGAAC TTTTTACAAT ACCCGGTCTT
ATGGGTTTGA TAATGCAGAA CATAACAATT ATATTAACTG CTTTTGCTAT TGTGAGGGAA
AGAGAAAAGG GAACTATTGA ACAGCTGATT GTAACACCTA TAAAATCAAT TGAACTGATA
TTGGGTAAAC TTGTACCTTA TATATTTCTT GGATTTGGAG ATTTTTTGGT GGCGCTATTA
TTTGGTGTTG CTTGGTTTAA AGTACCAGTG AGAGGTAGTA TATTTTCACT TTTGCTCTTT
GGATTGGAAT TTGTCCTGTG TGCTCTTATG ATAGGAATGC TTATCTCTTT TATTTCGAAG
ACCCAGCTTC AGGCAATGCA ACTTGCACTT TTGTTTTTAC TTCCAAGCGT TCTACTTTCA
GGTTTTATGT TTCCAAGAGA AGCAATGCCA CCTGTGATAA GGTTTTTAGG TAATTTTGTT
CCTCTTACTT ATTTTCTTAT AATTTTGCGA GGGATTGTTT TAAAAGGAGT AGGAGTTGAA
CAACTTTGGA AAGAAGTATT GGTATTAGTG TTTCTTGGAA TACTTCTTTT GCTGGTTTCT
GTAAAGAAAT TTTCAAAAAA ACTTGATTAA
|
|---|
| Protein sequence | MRGFSARRFF AIAKKEFIQI KRDKASFVLA FVAPFIMLML FGYAVKMDIE NVVIGILDMS
NTLESREIIK KLQNTRYFKP DLFAQNQKEI DEWLDSGKIK AALIIPSNFS TKLKQKRSPQ
ILFIVDGTDP TIAKTVFTSG ILTIQNMYNQ SILNKPFIDL RTRVKYNPSM KSELFTIPGL
MGLIMQNITI ILTAFAIVRE REKGTIEQLI VTPIKSIELI LGKLVPYIFL GFGDFLVALL
FGVAWFKVPV RGSIFSLLLF GLEFVLCALM IGMLISFISK TQLQAMQLAL LFLLPSVLLS
GFMFPREAMP PVIRFLGNFV PLTYFLIILR GIVLKGVGVE QLWKEVLVLV FLGILLLLVS
VKKFSKKLD
|
|---|
| |