| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1486 |
|---|
| Symbol | |
|---|
| ID | 7408145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | - |
|---|
| Start bp | 1567152 |
|---|
| End bp | 1568879 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 643715849 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002573357 |
|---|
| Protein GI | 222529475 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0336288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTCGA AGCTTTTTGG TTATACTATA TTAGTTGTGG TAGTTATAAC ACTTCTTCAA
GGAATTCTTT CATATGAGAC TTATAAAAAC ATATATATAG AGGAAAACAA AAAGTGGCTT
GTTGCAAAAA TAAATGAAGT TGAAAAATAC ATTTATTCTT TTGGTGTTGA TAAACTGAAT
AATATCTATA ACAAGGGCGA TTTTAGAGTA ACTATTGTTG GTAGCAGTGG GGTTGTTCTT
TACGACTCTG AAGCAAATGT AAAGAAAATG GAAAATCACT TAAAAAGACC AGAGATTGCA
AATGCCAATA GAGTTTTTGG AAAAGTAGAG TTTTCGATGA GAAGGAGCAA AACACTGGGG
CATTACTTTT TGTATGCAGC AAAAAAAGTT AAAATTTACA ATACATTAAT GTTTATAAGA
GTTTCAGTTC CTCTTGACAA AGTAGACACA ATCTTAAAAA AGGTTTTATT AAATACTCTA
AAATTTGCAG TGATGTGTAT TTTTCTGGGT ATAGCCTTGG CAATAGGAAT CTCATCTGTT
TTATATCAAC CGTTAAAAGG CCTGATTTCG CTTATTTCAG AAGGACTTGA AAAGTTTAGC
ATTCAAGATG TGAAAAGTCC AAAAGATTTG AAGTGGCTTA GTCTTAGCTT TTCAAAGATG
TATCAGCTTT TGGAGGAAAA GATTGGCGAA TCTAATATAT TAAGAAAAAG GCTCACTTCT
CTTTTAGACT CATTAGACAT TGGTATAATC TTTTTTGATA TGAATAAAAG AATACTTACG
TTCAACAGGG GAGCAGAAAA CATTCTTGAA ACTAACCTCA AAGTTGGATT TAGTTTACTT
GAATGCGTCC GAGTATATGA ACTTTTCGAG TTTCTTTTCC AACAGGATAT AAATGAAAAG
GAGATTGAAA TTAGTATCAA TAATAAAACA AAGTTTCTGA AAATAAATAA GAAGAAAATT
TCATATGAAG ACAATAAAGA AGGTATACTT TTAATATTAA GTGATATTAC CTTTTTGAAA
AAGTTAGAAA GAATTCGGTC TGACTTTGTG GCAAATGTAT CGCATGAACT CAAAACACCA
CTTACTTCAA TAAAGGGTTT TGTAGAAACA CTTAAAGATG GTGCAATTGA TGATAAAGAT
GTTGCTATTA AGTTTCTCAA CATTATTGAG GTTGAGGTAG AAAGGCTTGT GAGACTTATA
AATGATCTTC TCTATCTTTC GGAAATAGAG AATGCGGCAA TGCCCATTTT AGAAGAAAAA
GTGGTGGTTA AAGAAGTTGT GCTTGAGATT ATCGAACTTT TAAAAATAAA AGCTGAGAAG
AAGAATATTC AACTTGATAT AAAGGTCCAA GAGGGTCTTG AGATGAACAT ATATCGCGAT
TGGCTAAAGC AGATTTTTAT AAATTTAATA GATAATGCAA TTGTTTATAA CAAAGAAAAT
GGGAAAGTAT GGGTGACTGT AGAGAAATTA GATAACTTAA TTGTTATAAA GGTTAAGGAT
ACAGGAATTG GAATTCCTGA AAAGGAAATT GAGAGGATAT TTGAAAGATT TTACAGAGTG
GATAAGGGAA GGTCCCGAAA GTTTGGAGGC ACAGGCTTGG GTCTTTCTAT TGTAAAGCAC
ATAGTAGAGC TTTATGGAGG AAAAGTTTGG GTTGAAAGCC AGGAAGGTAT AGGCAGTGAG
TTTACGGTAA CAATTCCAAT TGTAAAAAAG GCTGACCCAC ATCAATAG
|
|---|
| Protein sequence | MRSKLFGYTI LVVVVITLLQ GILSYETYKN IYIEENKKWL VAKINEVEKY IYSFGVDKLN
NIYNKGDFRV TIVGSSGVVL YDSEANVKKM ENHLKRPEIA NANRVFGKVE FSMRRSKTLG
HYFLYAAKKV KIYNTLMFIR VSVPLDKVDT ILKKVLLNTL KFAVMCIFLG IALAIGISSV
LYQPLKGLIS LISEGLEKFS IQDVKSPKDL KWLSLSFSKM YQLLEEKIGE SNILRKRLTS
LLDSLDIGII FFDMNKRILT FNRGAENILE TNLKVGFSLL ECVRVYELFE FLFQQDINEK
EIEISINNKT KFLKINKKKI SYEDNKEGIL LILSDITFLK KLERIRSDFV ANVSHELKTP
LTSIKGFVET LKDGAIDDKD VAIKFLNIIE VEVERLVRLI NDLLYLSEIE NAAMPILEEK
VVVKEVVLEI IELLKIKAEK KNIQLDIKVQ EGLEMNIYRD WLKQIFINLI DNAIVYNKEN
GKVWVTVEKL DNLIVIKVKD TGIGIPEKEI ERIFERFYRV DKGRSRKFGG TGLGLSIVKH
IVELYGGKVW VESQEGIGSE FTVTIPIVKK ADPHQ
|
|---|
| |