| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Athe_1388 |
|---|
| Symbol | |
|---|
| ID | 7409131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerocellum thermophilum DSM 6725 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012034 |
|---|
| Strand | - |
|---|
| Start bp | 1472636 |
|---|
| End bp | 1473808 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643715753 |
|---|
| Product | Extracellular ligand-binding receptor |
|---|
| Protein accession | YP_002573261 |
|---|
| Protein GI | 222529379 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0615347 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAAA TTGTTTCAAT AATCCTCTTG TTAGTATTTG TGCTTTCAAT ATTTACTGTA
TCATTTGCTT CATCTAAAAA TGTCATCAAG ATAGGTGTAG ATTTAGAACT TTCACAGGCA
GTTGCTCAAT ACGGACAAAA AGAACTTGAA GGTATAAGAC TTGCAATTGA CGAAATCAAT
AAAAAAGGTG GTATTGGAGG TAAAAAGATT GAACTTGTAG TTATTGACAA CAAATCTGAC
AAGACCGAAG CTCAAAATGT TGCAACAAAA CTTGCTGTAA GAGAAAATGT TCTTGCTATT
TTAGGACCGG CAACTTCAGG TGCTACAAAG TCAGCTGCAG TTGCTGCAAC AAAGCATAAA
GTTCCTATAA TTTCACCTTC TGCAACAGAT GATGCAGTTA CAGTTGATGA AAAAACTGGC
AAAACAAAGA CATATGTTTT CAGAACATGT TTTAACGACT CATTCCAGGG AAATATAATG
GCAAACTTTG CATTGAAAAC TTTGAAAGCT AAAAAAGCAG CTATAATTTA TGATGCAACA
TCAGATTATA GTAAAGGTCT TTTAAAAAAT TTCAAGAATA CATTTGAAAA AGGCGGCGGA
AAAGTTATTG CTCAAGAGGC ATTTGGCAAG GGTGAACAAG ATTTTAGCAG CATACTTACA
AAAATAAGAG CCAAAAAACC AGATGTACTG TTTGCGCCTG TTTATTATGA TGAAGCAGGA
CTTATCATAA AACAGGCTCG TGAACTTGGA ATGAATATTC CTATACTTGG TGCAGATGGT
TTTGATGATC CGAAAGTTGT TGAAAAAGCT GGCAAAAAGA ATGCTAACAA TGTGTTTTTC
TCTGCTCATT ACTCTACCCA AGATACAGAT GTGAAGGTTC AAGAGTTTAT AAAGAAATTT
AAAGCAAAAT ATAATCAAGA ACCAAATGCA TTTGCTGCTC TTGGTTATGA CCTTGGGTAT
TTTATTGCAG ATGCTCTCAA AAGAGCTAAC TTAAAGTTTG ACAGTGTAGC AAAGGACAGA
GAAAGGTTGA AAGCGGCAAT CGAAAATACA AAGAACTTTG TTGGTGTTAC AGGAATTATA
AGCATAAATA AATATCACAA TGCTGAAAAA TCTGCTGTTA TTATTGAGCT CAAAGATGGT
GTACAAAAAT TTAAACAGAA ACTTAATCCA TAA
|
|---|
| Protein sequence | MKKIVSIILL LVFVLSIFTV SFASSKNVIK IGVDLELSQA VAQYGQKELE GIRLAIDEIN
KKGGIGGKKI ELVVIDNKSD KTEAQNVATK LAVRENVLAI LGPATSGATK SAAVAATKHK
VPIISPSATD DAVTVDEKTG KTKTYVFRTC FNDSFQGNIM ANFALKTLKA KKAAIIYDAT
SDYSKGLLKN FKNTFEKGGG KVIAQEAFGK GEQDFSSILT KIRAKKPDVL FAPVYYDEAG
LIIKQARELG MNIPILGADG FDDPKVVEKA GKKNANNVFF SAHYSTQDTD VKVQEFIKKF
KAKYNQEPNA FAALGYDLGY FIADALKRAN LKFDSVAKDR ERLKAAIENT KNFVGVTGII
SINKYHNAEK SAVIIELKDG VQKFKQKLNP
|
|---|
| |