Gene Athe_1375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_1375 
SymbolpyrB 
ID7409118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp1459279 
End bp1460196 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content39% 
IMG OID643715740 
Productaspartate carbamoyltransferase catalytic subunit 
Protein accessionYP_002573248 
Protein GI222529366 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0540] Aspartate carbamoyltransferase, catalytic chain 
TIGRFAM ID[TIGR00670] aspartate carbamoyltransferase 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACATT TGCTTGGGCT AAGAGAGCTT TCAAAAGAGG ATATCATAAA AATACTGAAT 
CTTGCAAAAG ATATGAAGAC AATTTTAAAA AGCGAAACAA AAAAGACTCC TCATCTGCAG
GGGTATTCGG TTGTAACTCT GTTTTATGAA AATAGTACCA GGACACGAAC ATCGTTTGAA
CTTGCAGCAA AGTTTATGAG TGCAAATACA ACATCAATCT CGGTGCAAAC CAGCAGTGTG
CAGAAAGGGG AATCTTTGCT TGACACTGTA AAAACTTTGG AAGCTCTAAA AACAGATGTG
CTAATTGTCA GACATGCTGT CTCTGGTGTG CCGCATTTTA TTGCTAAAAA CTGCTCATTT
TCAGTCATAA ACGCTGGTGA TGGAATGAAC GAGCATCCAA CTCAGGCACT GCTTGATATG
TTCACAATAA GAGAAAGGCT TGGAACAATT GAGAGGTTGA AGATAGCAAT CATTGGCGAT
ATTTTTCACA GCAGGGTTGC AAGAAGCAAC ATATGGGGGC TTTCCAAGTT TGACAACCAA
ATCACAGTGT TTGGACCACA AACGCTTATT CCGCCTTATA TTGAAAACTT TGCTTATGTT
GCATCATCTT TAGAAGAGGC AGTCTCAGGA AAAGATGTTG TAATAGATTT GAGGATTCAG
CTTGAAAGAC AAAAACGAGG CTTTATAACC TCAAAACAAG AATATTACAA GTTTTATGGA
TTAAACGAAG ATATAATGAG GTATATTTCA GGCAGCACCC TGATTATGCA TCCTGGTCCT
GTCAACAGGG GAGTTGAAAT TTCTTCAGAG GTGTTGCAGC TGCCAAATTC TACAATTGAT
GAGCAGGTCA CAAACGGCAT TGCTGTTAGA ATGGCAGTTT TATACCTTTG CACGCGCAAG
GAGGGAATTT ATAGGTGA
 
Protein sequence
MKHLLGLREL SKEDIIKILN LAKDMKTILK SETKKTPHLQ GYSVVTLFYE NSTRTRTSFE 
LAAKFMSANT TSISVQTSSV QKGESLLDTV KTLEALKTDV LIVRHAVSGV PHFIAKNCSF
SVINAGDGMN EHPTQALLDM FTIRERLGTI ERLKIAIIGD IFHSRVARSN IWGLSKFDNQ
ITVFGPQTLI PPYIENFAYV ASSLEEAVSG KDVVIDLRIQ LERQKRGFIT SKQEYYKFYG
LNEDIMRYIS GSTLIMHPGP VNRGVEISSE VLQLPNSTID EQVTNGIAVR MAVLYLCTRK
EGIYR