Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_0787 |
Symbol | |
ID | 7407974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 877256 |
End bp | 877990 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643715165 |
Product | sporulation sigma factor SigE |
Protein accession | YP_002572675 |
Protein GI | 222528793 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.761292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTTG ATTCTAATAT TTTGCAATAT GTATTAAAAA TATTTAAAAA ACTTGGTTTT AAACTTTCAA AAAATCAGAT AATGGAGATT TTCTATATTG GTGGATGTGA TACTCTTCCG CCGCCGCTTA CACCTGACGA AGAAGCCCAG ATTTTATACA AGATTCATTA CCAAGGGAAA GAAGAATTAA AAAAGCTTTT AGTAGAAAGG AATTTGAGGT TGGTTGTCTA CATTGCTAGA AGATTTGAAA ATACAAAGAT TAATCTTGAA GACCTTGTTT CAATAGGCAC AATAGGTTTG ATTAAAGCAA TAAATACATA TAATCCAAAC AAGAATATAA AACTTGCTAC TTATGCTTCA AAATGTATTG AAAATGAAAT TTTGATGTTT TTAAGACGAA ATTCAAACAA AAAGCTTGAG TTGTCAATAG ACGAGCCACT AAATGTAGAT TGGGATGGCA ATGAGCTTTT ACTTTCTGAT GTTCTGGGAA CTGATACAGA AGAAATTTAC AACAGGATTG AGAGTAGTGT GGAGAGAGAA GCACTTTTGC GAGCAATTCA AAAACTTCCG TCAAGGGAAA AAAAGATTGT TGAACTGAGA TTTGGATTTG GAGATGGTGG AGAAAAAACT CAAAAAGAGG TTGCAGATAT GCTGGGGATA TCACAAAGTT ATATCTCGCG CTTGGAAAAA AAGATTATAA CAAGACTAAA AAAAGAACTG GCAAAAATTA TATAA
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Protein sequence | MKLDSNILQY VLKIFKKLGF KLSKNQIMEI FYIGGCDTLP PPLTPDEEAQ ILYKIHYQGK EELKKLLVER NLRLVVYIAR RFENTKINLE DLVSIGTIGL IKAINTYNPN KNIKLATYAS KCIENEILMF LRRNSNKKLE LSIDEPLNVD WDGNELLLSD VLGTDTEEIY NRIESSVERE ALLRAIQKLP SREKKIVELR FGFGDGGEKT QKEVADMLGI SQSYISRLEK KIITRLKKEL AKII
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