Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Athe_0625 |
Symbol | secD |
ID | 7406966 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerocellum thermophilum DSM 6725 |
Kingdom | Bacteria |
Replicon accession | NC_012034 |
Strand | + |
Start bp | 709214 |
End bp | 710461 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643715006 |
Product | preprotein translocase subunit SecD |
Protein accession | YP_002572522 |
Protein GI | 222528640 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000418015 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAATA AAAGCTTAGC AAAGTTTCTG ATAGGATGCT TAGTAATAGC CTTTGCATTT TACATAGTGT TTTTTGGGCT GGAAATTGGA ACTGCAAGCA TCCCGTCAGT CCAAAAAGTT ATAAGGTATG GGCTTGATTT GAAAGGCGGC GTTTACATTG TATATGAGGC AGCAAAAGAG AATCCAACAA GAAGAGAAAT GGAATCAGCG TTGCAGCTTA TCAGAACAAG GCTTGACATG AGAAACTTTT ATGATGCAAC GGCGACAATT CAGGGGTCAA AGAGAATAAG GGTAGAAATT CCGGGTGTCA AAGACCCTGA TGAAGCTATA CAATATATAG GAAGAACAGC TTTGATTGAG TTCAAGGGAC CTTCTGGAGA TTTGATTGTT TCAGGTAGAA ACGTTGTTGA TGCATATGCA CAGCAGACAA CATCAGGATA CGTTGTTGCA CTAAAGTTTG ACAAAGAGGG AACAAAAAAG TTTGCAGAAG GGACAAAAAA ATATTTGGGT CAGAACATTG GAATTTATCT TGATGGCAAG CTCATTTCAA ATCCTGTTGT TAGAGCAGAG ATTGACAATG GTGAAGCTGT GATTGAAGGT ATGAAAGATC TGGAAGAGGC TAAAACACTT GCTCAGCAGA TAAAAGCTGG TGCACTGCCA TTTGCTTTGA ATGTGATAGA GAGCAAGGCT ATAGGACCTT CACTTGGAAA TGAGGCTTTT AAATCAACTT TAAAGGCTGG AATTATTGGA ATCTTGCTTG TGTTCCTGTT CATGATAATT TTCTACAGAC TGCCAGGGCT TGTTGCAGAT ATAGCTTTAG TTGCTTATAT AGTTATTCTG GTTGCAATTG TGGGGTATGC AAAGATAACT TTGACCCTCC CTGGTATAGC AGGTATAATT CTGTCTGCCG GCATGGCAGT TGATGCGAAT ATCTTGATCT TTGCAAGATT AAAAGAGGAG CTGAGAAGTG GAAAGACATT AAGAGCTGCT ATGGATGCAG GTTTTAAAAG AGCGCTTAAT GCTGTTATTG ACTCTAACGT GACAACGATA ATAGCAGGAA TTGTTCTTTT GTTCTTAGGA ACAGGTCCTA TTAAAGGTTT TGCATGGACG CTCACAATTG GTATTGTGGT ATCGTTCTTC ACAGCAATCA CTGTTACAAG ATTTTTGCTT ACTTCAATTA TAAATACAGG ACTTTTCAAA GATATCAGGT GGTATGGCGG TAAGAAAACC AGGGAGGTGG ATGCTTAA
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Protein sequence | MQNKSLAKFL IGCLVIAFAF YIVFFGLEIG TASIPSVQKV IRYGLDLKGG VYIVYEAAKE NPTRREMESA LQLIRTRLDM RNFYDATATI QGSKRIRVEI PGVKDPDEAI QYIGRTALIE FKGPSGDLIV SGRNVVDAYA QQTTSGYVVA LKFDKEGTKK FAEGTKKYLG QNIGIYLDGK LISNPVVRAE IDNGEAVIEG MKDLEEAKTL AQQIKAGALP FALNVIESKA IGPSLGNEAF KSTLKAGIIG ILLVFLFMII FYRLPGLVAD IALVAYIVIL VAIVGYAKIT LTLPGIAGII LSAGMAVDAN ILIFARLKEE LRSGKTLRAA MDAGFKRALN AVIDSNVTTI IAGIVLLFLG TGPIKGFAWT LTIGIVVSFF TAITVTRFLL TSIINTGLFK DIRWYGGKKT REVDA
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