Gene Athe_0430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0430 
Symbol 
ID7407507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp490735 
End bp491496 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content33% 
IMG OID643714817 
Productcell wall hydrolase/autolysin 
Protein accessionYP_002572335 
Protein GI222528453 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID[TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGGG AAATAGAGAT AAGGGAAGGA ATAAAAAGAT TGAAAAATAA AAAATTAAAG 
CTATTTTCAG TTTGCACAGC GTTTTTAGCT TTTATAGCTT TAACAGCTTT TTTGTTCGTA
AATACCAATA TATTAAAAGT TGTTGAGATA TTTAGTGAAA ATAATTGTCA AGCAAAAAAT
CTTGTTGTTG TTGACCCGGG GCACGGTGGG TTTGACCCGG GGGCAGTGAG TGGTGATATA
AAAGAATCTG TGATAAACCT TCAGATTGCA AGAAAATTGA AGGAATATTT TGAGATGTTT
GGTTTTAAAG TTCTTCTTAC ACGTTCAACA GAAGATGATT TGAGCGAATA TAATAAAAAG
GCCCATGACT TAAAAAAGAG GAAAGAGATT GTTTTAGAAA ATAATCCTCA GGTTTTTATC
TCTATTCATT TAAACAGCTT TCCGGTGAGT AAGTACTTTG GTGCGCAGGT GTTTTATGAC
AAATCAAATG AGGAGGCGAA AAAACTTGCT TTGTTTGTCC AAAATGAACT GAGATATATG
CCAAATGGAC TTGTAAATAG ACGACAGCCA AAACCAATAG ATGTATATAT CCTGAAAAAC
CTCAAAATTC CTGCTATATT GATAGAATGC GGTTTTATGT CAAACAAAAT GGAACTGTCT
TTGCTCCAGA ACCATCAATA CCAAGACTGG CTTTCATACT CAATATTGAA AGGAGTTTTA
AGCTATTTAG ACCAAAAAAA GGAGATGATA AAAAGTGAAT GA
 
Protein sequence
MKWEIEIREG IKRLKNKKLK LFSVCTAFLA FIALTAFLFV NTNILKVVEI FSENNCQAKN 
LVVVDPGHGG FDPGAVSGDI KESVINLQIA RKLKEYFEMF GFKVLLTRST EDDLSEYNKK
AHDLKKRKEI VLENNPQVFI SIHLNSFPVS KYFGAQVFYD KSNEEAKKLA LFVQNELRYM
PNGLVNRRQP KPIDVYILKN LKIPAILIEC GFMSNKMELS LLQNHQYQDW LSYSILKGVL
SYLDQKKEMI KSE