Gene Athe_0400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAthe_0400 
Symbol 
ID7409335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerocellum thermophilum DSM 6725 
KingdomBacteria 
Replicon accessionNC_012034 
Strand
Start bp460084 
End bp460971 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content35% 
IMG OID643714789 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002572307 
Protein GI222528425 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000506379 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAACA GAACAAAAAC GCAAGAATAC TTAACAGCTT TTGTCATGCT GCTTCCTTAT 
ATACTGTCTT TTTGTGTATT TTTTGCTTAC CCGCTTATAA AGGCTTTTAT GATAAGTTTT
CAGAACTTTT CATTCTTAGG AGATGCTCCA CCTAAATTTG TAGGCCTTGC TAACTATAAA
GAGGCGCTGA CAAACAAGAT GTTTTTAGAT TCTATTCTTA ACACACTTTA TTATTCGGTA
TTAGTTGTTC CTACTCAGCT TATTATTGCT CTCATTTTAG CTGTGATAGT AAATGACAAG
GTGAAATTCA AGGAGTTTTT CAGAACAACA TATTATCTTC CCACGGTTAC ATCACCTGTA
GCAGTATCGA TTATATTTCT GTTTTTGTAC AAAACAGATG GGCTTGTGAA TCAGATTTTA
AGTCATATTG GGATTACTCC TCGAAATTGG TTCAATGAAC CTTCTTTTGT GATGCCCGCA
ATTGTGAGTG TTGCTGTTTG GGGGTCTGTA GGGTTTTATA TGGTTACATT TTTGTCTGGA
CTTTCAACAA TTCCAGACCA GCTTTATGAA GCAGCAGAAG TTGAAGGTGC AGGAGAATTT
ATTAAGCTTA TTAAAATCAC AATACCTCTT TTAAAACCGA TGATATTTTT CAACACAGTT
GTATCTTTTA TTAGCACTCT CCAGATGTTT GATTTGTCAT ACATTATAGG CGGTTCTGAT
GGTGGTCCCA TGGGAAAAGC AATGACAATG GTTGTGATGA TATACAGAAC AGCTTTTAAA
GAGTTCAACA TGGGTGTTGC TTCAGCAATG GCGTTTGTTG TGTTTGGGAT TATCTTTGTA
TTGACATTAA TTCAGCGAAA ATTTTTTGGC GAGGAAATGT CATATTAA
 
Protein sequence
MRNRTKTQEY LTAFVMLLPY ILSFCVFFAY PLIKAFMISF QNFSFLGDAP PKFVGLANYK 
EALTNKMFLD SILNTLYYSV LVVPTQLIIA LILAVIVNDK VKFKEFFRTT YYLPTVTSPV
AVSIIFLFLY KTDGLVNQIL SHIGITPRNW FNEPSFVMPA IVSVAVWGSV GFYMVTFLSG
LSTIPDQLYE AAEVEGAGEF IKLIKITIPL LKPMIFFNTV VSFISTLQMF DLSYIIGGSD
GGPMGKAMTM VVMIYRTAFK EFNMGVASAM AFVVFGIIFV LTLIQRKFFG EEMSY