| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Arth_4076 |
|---|
| Symbol | |
|---|
| ID | 4447718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter sp. FB24 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008541 |
|---|
| Strand | - |
|---|
| Start bp | 4598586 |
|---|
| End bp | 4600091 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639691907 |
|---|
| Product | 3-carboxy-cis,cis-muconate cycloisomerase |
|---|
| Protein accession | YP_833551 |
|---|
| Protein GI | 116672618 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0015] Adenylosuccinate lyase |
|---|
| TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACTGCTT CCCACCTGTC GGATGGCGAC GTCGGACTCC TTAGCCCCGT GTCGGCGTCG
CCTTCGGTGG CGGTGCTGAC GGGGGACCGT GCGGTCCTTG CGGCGATCCT CGCCGTCGAG
GCCGGCTGGG CCTCGGTACT GGAGAAGGCC GGCCTCGCGC CAGCCGGCTC TGCCGCCGTC
GTGGATGCCG CCGCGGACGT GGACCGCTAT GACGTGGCCG GCATCGCCGT CCGCGCGCAG
GGTGGGGCCA ATCCGGTCAT CCCGCTGCTT GCTGACCTCC GCGCGGAGGT CAAGGCGCTG
GACACGGAGA GCGTTGGTGC ACTGCGTGCG GTGCACGCCT CGCTGACCAG CCAGGATGTG
CTGGACTCGG CGCTGATGCT GCTGGCCAGG AACGCCGTGA CCGCACTCAT GACTGACGTT
CGCGCAATCA CGACGGCGCT GGCGGTCTTT GCGGAGCAGC ATGCGGACAC GCTGTGCGTG
GGCAGGAGCC TGACGCAGCA CTCGCTGCCG TTTACGTTCG GGCTCAAGGC GGCGCAGTGG
TTCCACGGAC TGGCCGCCGC TGCCCGGCGC CTTGAGGCGG TGGAGCTGCC GCTGCAGACG
GGCGGCGCCG CGGGAACGCT TGCGGCCGGG ACGGTGCTCA CCAAGGGATC GGTGGATACG
CCCTTCGACC TGTCGGGCAA CCTGGCCGCG CACCTTGGCC TGGCGGTGGC ACCGGGTCCG
TGGCACACGA ACCGGCTGGC TGTGACATCG CTGGGCGATG CCCTGGCAGC GGTGACGGAC
GCGCTGGGCA AGATCGCCGG CGATGTGCTG TTCCTCAGCC GGCCGGAGGT GGGAGAGCTC
GCCGAACCCC GGGCCGCCGG TCGCGGAGTG TCCTCGGCCA TGCCGCAGAA ACAGAACCCC
GTGCTGTCCG TGCTGGTTCG CAGCGCCGCG CTGCAGGCAC CCGGCCAGGC CGCGCAGCTG
CATCTGGCAG CGGCCAATTT CAACGATGAA CGTCCCGACG GCGCCTGGCA CAGCGAATGG
CCGGCCTTCC GCCAGCTCCT TCGGCTGGCA CTTGGAGCCG CGGGGCACCT GCGGGAACTC
GCGGAGGGCC TTCAGGTCTT CCCGGCTGCC ATGCGCCGCA ACCTCGAACT GTCCGGGCCG
CTGCTGCTCA GCGAGGGAGT ATCCGCCGCC GTGGCGCCGC TGCTCGAAGA ACGGGACGGC
CGCACCGGCA AGCAACAGCT CCAGGACGTG GTGGACCGGA CGCTCCAGGC CCCGCCCGCC
GAGCAGTCCG GAACATACCG CCGACTGCTG CGGGAGGCCG TTCCGGCCAG CGCCCTGTCC
GACGAACAGC TGGAAGAACT CCTGGATCCT GCCAGCTACC TGGGCCAGGC CGGCGAAATT
TCCCGCCGCA TCCTGGCCGC TTTCCCCGAC TTTGCCGGCA GCGGTGAACC ACCGGCTGAC
GCAGGCCGGG CCATTCCCGC CGGAACCACT ACCGAAACAG ACCTGAACGG AGACCCCCGT
GGCTAG
|
|---|
| Protein sequence | MTASHLSDGD VGLLSPVSAS PSVAVLTGDR AVLAAILAVE AGWASVLEKA GLAPAGSAAV
VDAAADVDRY DVAGIAVRAQ GGANPVIPLL ADLRAEVKAL DTESVGALRA VHASLTSQDV
LDSALMLLAR NAVTALMTDV RAITTALAVF AEQHADTLCV GRSLTQHSLP FTFGLKAAQW
FHGLAAAARR LEAVELPLQT GGAAGTLAAG TVLTKGSVDT PFDLSGNLAA HLGLAVAPGP
WHTNRLAVTS LGDALAAVTD ALGKIAGDVL FLSRPEVGEL AEPRAAGRGV SSAMPQKQNP
VLSVLVRSAA LQAPGQAAQL HLAAANFNDE RPDGAWHSEW PAFRQLLRLA LGAAGHLREL
AEGLQVFPAA MRRNLELSGP LLLSEGVSAA VAPLLEERDG RTGKQQLQDV VDRTLQAPPA
EQSGTYRRLL REAVPASALS DEQLEELLDP ASYLGQAGEI SRRILAAFPD FAGSGEPPAD
AGRAIPAGTT TETDLNGDPR G
|
|---|
| |